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Philipp Schneider
committed
{
"cells": [
{
"attachments": {},
"cell_type": "markdown",
"metadata": {},
"source": [
"# Pipeline to create a small test dataset\n",
"Goal: Check if changes to transformations scripts or to the ontologies apply correctly in the data."
]
},
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"outputs": [],
"source": [
"from rdflib import Graph\n",
"\n",
"def merge_graphs(input_path_1, input_path_2, output_path):\n",
" g = Graph()\n",
" g.parse(input_path_1)\n",
" g.parse(input_path_2)\n",
" g.serialize(destination=output_path, format='ttl')"
]
},
{
"cell_type": "code",
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"src/rdf-mappings/map-tblBranch.py:484: DtypeWarning: Columns (2,9,11,16,17,18,19,20,21,31,38,39,49,56,58,62,67,71,72,73,74,75,77,79,82,85,86,88,94,97,98,99,100,102,104,106,109,110,112,114,117,118,119,122,124,125,126,127,128,129,130,131,132,133,134,135,136,138,139,140,141,142,143,144,145,149,150,151,152,153,154,157,165,166,168,169,170,171,172,173,174,175,176,177,178,179,180,181,182,183,184,185,186,188,189,190,194,196) have mixed types. Specify dtype option on import or set low_memory=False.\n",
" df_tblBranch = pd.read_csv(csv_input_path, sep='\\t')\n",
" Column Column2 BranchID ... GpSel TinctChanged Column 201\n",
"0 0 NaN 1 ... NaN 1.0 NaN\n",
"1 1 NaN 2 ... NaN 1.0 NaN\n",
"2 2 NaN 3 ... NaN 1.0 NaN\n",
"3 3 NaN 4 ... NaN 1.0 NaN\n",
"4 4 NaN 5 ... NaN 1.0 NaN\n",
"... ... ... ... ... ... ... ...\n",
"40859 40859 NaN 8318_A_1 ... NaN NaN NaN\n",
"40860 40860 NaN 8425_1 ... 0.0 NaN 0.0\n",
"40861 40861 NaN 8425_A_1 ... NaN NaN NaN\n",
"40862 40862 NaN 8425_B_1 ... NaN NaN NaN\n",
"40863 40863 NaN 13770_1 ... 0.0 NaN 1.0\n",
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"[40864 rows x 205 columns]\n",
"chief\n",
"compon\n",
"chief\n",
"chief\n",
"chief\n",
"chief\n",
"chief\n",
"eschutch\n",
"chief\n",
"chief\n",
"chief\n",
"chief\n",
"chief\n",
"shield\n",
"stag\n",
"compon de Harcourt\n",
"chief\n",
"chief\n",
"chief\n",
"\n",
"chief\n",
"border\n",
"lozenge\n",
"lozenge\n",
"\n",
"\n",
"chief\n",
"chief\n",
"lozenge\n",
"chief\n",
"chief\n",
"compon\n",
"compon\n",
"escuch\n",
"chief\n",
"\n",
"\n",
"escurch\n",
"banner\n",
"chief\n",
"banner\n",
"banner\n",
"banner\n",
"banner\n",
"banner\n",
"escuch\n",
"Created data/rdf-output/test-dataset/knowledge-graph-blazon-test-dataset.ttl\n",
"Created data/rdf-output/test-dataset/knowledge-graph-blazon-test-dataset.jsonld\n",
"Export TBox to file...\n",
"Create data/rdf-output/digital-heraldry-ontology.ttl\n"
]
}
],
"source": [
"!python src/rdf-mappings/map-tblBranch.py"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"merge_graphs('data/rdf-output/test-dataset/knowledge-graph-blazon-test-dataset.ttl', 'data/ontologies/digital-heraldry-ontology.ttl', 'data/rdf-output/test-dataset/knowledge-graph-blazon-test-dataset.ttl')"
]
},
{
"cell_type": "code",
"execution_count": 1,
Philipp Schneider
committed
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
Philipp Schneider
committed
"src/rdf-mappings/map-tblArmItems.py:92: FutureWarning: Inferring datetime64[ns] from data containing strings is deprecated and will be removed in a future version. To retain the old behavior explicitly pass Series(data, dtype=datetime64[ns])\n",
" df_metadata = pd.read_excel(metadata_file)\n",
"Empty DataFrame\n",
"Columns: [Column, ArmItemID, ArmCode, ItemNr, FolNr, SrNr, published_as_rdf, checked_for_publication, descriptor_id, description_event_id, description_time, BranchIDR, CrestPresent, HelmetPresent, MantlingPresent, BannerItem, PersonItem, ArmTxt, ArmIdf, IdxName, AiCmnt, ItemStatus, ItemQual, Editor, ArmSegm, AIRefs, Revised, NeedCHK, Ex1ArmItem, Ex2ArmItem, Ex3ArmItem, Ex4ArmItem, Ex5ArmItem, Ex6ArmItem, SortNr, PaSource, PaRefNr, ArmItemNr_Popoff, GlAIid, Select, Obs, CreFigIDR, CreMulti, CreTint, CreOrnIDR, TGmember]\n",
"Index: []\n",
"Traceback (most recent call last):\n",
" File \"src/rdf-mappings/map-tblArmItems.py\", line 96, in <module>\n",
" raise ValueError\n",
"ValueError\n"
Philipp Schneider
committed
"source": [
"!python src/rdf-mappings/map-tblArmItems.py -t"
Philipp Schneider
committed
]
"execution_count": 2,
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"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
" ArmCode CoACount ... armorial-position-in-ms grid-system\n",
"0 A 324.0 ... NaN NaN\n",
"1 ABL NaN ... NaN NaN\n",
"2 ABR NaN ... NaN NaN\n",
"3 ACA NaN ... NaN NaN\n",
"4 ACS NaN ... NaN NaN\n",
".. ... ... ... ... ...\n",
"771 NaN NaN ... NaN NaN\n",
"772 NaN NaN ... NaN NaN\n",
"773 NaN NaN ... NaN NaN\n",
"774 NaN NaN ... NaN NaN\n",
"775 NaN NaN ... NaN NaN\n",
"\n",
"[776 rows x 36 columns]\n",
"Creating manuscript entities...\n",
"Created data/rdf-output/test-dataset/knowledge-graph-object-test-dataset.ttl\n",
"Created data/rdf-output/test-dataset/knowledge-graph-object-test-dataset.jsonld\n",
"Loading Knowledge Graph file...\n",
"Linking coat of arms representations to manuscript entities...\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
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"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSBEL\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSMAN\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"http://digitalheraldry.org/digital-heraldry-ontology/object#MSNLU\n",
"Serialilzing representation graph...\n"
]
}
],
"source": [
"!python src/rdf-mappings/integrate_manuscript_metadata_into_kg.py"
]
Philipp Schneider
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},
{
"cell_type": "code",
"execution_count": 7,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"http://172.28.34.103/!DOCTYPE html does not look like a valid URI, trying to serialize this will break.\n"
]
},
{
"ename": "BadSyntax",
"evalue": "at line 5 of <>:\nBad syntax (expected '.' or '}' or ']' at end of statement) at ^ in:\n\"b'<!DOCTYPE html>\\n<html>\\n\\n<head>\\n '^b'<meta charset=\\'utf-8\\'>\\n <link rel=\"icon\" href=\"/assets/no_a'...\"",
"output_type": "error",
"traceback": [
"Traceback \u001b[0;36m(most recent call last)\u001b[0m:\n",
" File \u001b[1;32m~/opt/anaconda3/envs/dho_kg_integration/lib/python3.8/site-packages/IPython/core/interactiveshell.py:3398\u001b[0m in \u001b[1;35mrun_code\u001b[0m\n exec(code_obj, self.user_global_ns, self.user_ns)\n",
" Input \u001b[1;32mIn [7]\u001b[0m in \u001b[1;35m<cell line: 19>\u001b[0m\n resp = g.parse(endpoint, format='text/turtle')\n",
" File \u001b[1;32m~/opt/anaconda3/envs/dho_kg_integration/lib/python3.8/site-packages/rdflib/graph.py:1267\u001b[0m in \u001b[1;35mparse\u001b[0m\n raise se\n",
" File \u001b[1;32m~/opt/anaconda3/envs/dho_kg_integration/lib/python3.8/site-packages/rdflib/graph.py:1258\u001b[0m in \u001b[1;35mparse\u001b[0m\n parser.parse(source, self, **args) # type: ignore[call-arg]\n",
" File \u001b[1;32m~/opt/anaconda3/envs/dho_kg_integration/lib/python3.8/site-packages/rdflib/plugins/parsers/notation3.py:1913\u001b[0m in \u001b[1;35mparse\u001b[0m\n p.loadStream(stream)\n",
" File \u001b[1;32m~/opt/anaconda3/envs/dho_kg_integration/lib/python3.8/site-packages/rdflib/plugins/parsers/notation3.py:434\u001b[0m in \u001b[1;35mloadStream\u001b[0m\n return self.loadBuf(stream.read()) # Not ideal\n",
" File \u001b[1;32m~/opt/anaconda3/envs/dho_kg_integration/lib/python3.8/site-packages/rdflib/plugins/parsers/notation3.py:440\u001b[0m in \u001b[1;35mloadBuf\u001b[0m\n self.feed(buf)\n",
" File \u001b[1;32m~/opt/anaconda3/envs/dho_kg_integration/lib/python3.8/site-packages/rdflib/plugins/parsers/notation3.py:466\u001b[0m in \u001b[1;35mfeed\u001b[0m\n i = self.directiveOrStatement(s, j)\n",
" File \u001b[1;32m~/opt/anaconda3/envs/dho_kg_integration/lib/python3.8/site-packages/rdflib/plugins/parsers/notation3.py:488\u001b[0m in \u001b[1;35mdirectiveOrStatement\u001b[0m\n return self.checkDot(argstr, j)\n",
" File \u001b[1;32m~/opt/anaconda3/envs/dho_kg_integration/lib/python3.8/site-packages/rdflib/plugins/parsers/notation3.py:1149\u001b[0m in \u001b[1;35mcheckDot\u001b[0m\n self.BadSyntax(argstr, j, \"expected '.' or '}' or ']' at end of statement\")\n",
"\u001b[0;36m File \u001b[0;32m~/opt/anaconda3/envs/dho_kg_integration/lib/python3.8/site-packages/rdflib/plugins/parsers/notation3.py:1646\u001b[0;36m in \u001b[0;35mBadSyntax\u001b[0;36m\u001b[0m\n\u001b[0;31m raise BadSyntax(self._thisDoc, self.lines, argstr, i, msg)\u001b[0m\n",
"\u001b[0;36m File \u001b[0;32m<string>\u001b[0;36m\u001b[0m\n\u001b[0;31mBadSyntax\u001b[0m\n"
]
}
],
"source": [
"from rdflib import Graph\n",
"from rdflib.plugins.sparql import prepareQuery\n",
"\n",
"# Define the SPARQL query\n",
"query = prepareQuery('''\n",
" SELECT ?subject ?value\n",
" WHERE {\n",
" ?subject <http://digitalheraldry.org/digital-heraldry-ontology/entity#attributesCoATo> ?value .\n",
" }\n",
" ''')\n",
"\n",
"# Define the endpoint URL\n",
"endpoint = 'http://172.28.34.103/sparql'\n",
"\n",
"# Create a new RDF graph\n",
"g = Graph()\n",
"\n",
"# Send a GET request to the SPARQL endpoint and parse the response as RDF/XML\n",
"resp = g.parse(endpoint, format='text/turtle')\n",
"\n",
"# Check whether the parse method returned a valid RDF graph object\n",
"if not resp:\n",
" raise ValueError('Unable to parse RDF data from the endpoint')\n",
"\n",
"# Bind the graph to the namespace\n",
"g.bind('dh', 'http://digitalheraldry.org/digital-heraldry-ontology/entity#')\n",
"\n",
"# Send the SPARQL query to the endpoint and print the results\n",
"for row in g.query(query):\n",
" print(row)\n"
]
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committed
}
],
"metadata": {
"kernelspec": {
"display_name": "dho_kg_integration",
"language": "python",
"name": "python3"
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"language_info": {
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"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
Philipp Schneider
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"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
Philipp Schneider
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"version": "3.8.12"
},
"orig_nbformat": 4,
"vscode": {
"interpreter": {
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