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# -*- coding: utf-8 -*-
"""
/***************************************************************************
HUB TimeSeriesViewer
A QGIS based time series viewer
copyright : (C) 2017 by HU-Berlin
email : benjamin.jakimow@geo.hu-berlin.de
***************************************************************************/
/***************************************************************************
* *
* This program is free software; you can redistribute it and/or modify *
* it under the terms of the GNU General Public License as published by *
* the Free Software Foundation; either version 2 of the License, or *
* (at your option) any later version. *
* *
***************************************************************************/
"""
import os, sys, re, fnmatch, collections, copy, traceback, six
import logging
logger = logging.getLogger(__name__)

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from timeseriesviewer import jp, mkdir, DIR_SITE_PACKAGES, file_search
from timeseriesviewer.timeseries import *
#I don't know why, but this is required to run this in QGIS
#todo: still required?
path = os.path.abspath(jp(sys.exec_prefix, '../../bin/pythonw.exe'))
if os.path.exists(path):
multiprocessing.set_executable(path)
sys.argv = [ None ]
#ensure that required non-standard modules are available
import pyqtgraph as pg
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class TsvMimeDataUtils(QObject):
def __init__(self, mimeData):
assert isinstance(mimeData, QMimeData)
super(TsvMimeDataUtils, self).__init__()
self.mimeData = mimeData
self.xmlDoc = QDomDocument()
if self.mimeData.hasText():
self.xmlDoc.setContent(self.mimeData.text())
self.xmlRoot = self.xmlDoc.documentElement()
pass
def hasRasterStyle(self):
if self.xmlRoot.tagName() == 'qgis':
elem = self.xmlRoot.elementsByTagName('rasterrenderer')
return elem.count() != 0
return False
def rasterStyle(self, qgisDataType):
elem = self.xmlRoot.elementsByTagName('rasterrenderer').item(0).toElement()
type = str(elem.attribute('type'))
from qgis.core import QGis, QgsContrastEnhancement
def bandSettings(colorName):
band = int(elem.attribute(colorName + 'Band'))
ceNode = elem.elementsByTagName(colorName + 'ContrastEnhancement').item(0)
vMin = float(ceNode.firstChildElement('minValue').firstChild().nodeValue())
vMax = float(ceNode.firstChildElement('maxValue').firstChild().nodeValue())
ceName = ceNode.firstChildElement('algorithm').firstChild().nodeValue()
ceAlg = QgsContrastEnhancement.contrastEnhancementAlgorithmFromString(ceName)
ce = QgsContrastEnhancement(qgisDataType)
ce.setContrastEnhancementAlgorithm(ceAlg)
ce.setMinimumValue(vMin)
ce.setMaximumValue(vMax)
return band, ce
style = None
if type == 'multibandcolor':
A = int(elem.attribute('alphaBand'))
O = int(elem.attribute('opacity'))
R, ceR = bandSettings('red')
G, ceG = bandSettings('green')
B, ceB = bandSettings('blue')
style = QgsMultiBandColorRenderer(None, R, G, B)
style.setRedContrastEnhancement(ceR)
style.setGreenContrastEnhancement(ceG)
style.setBlueContrastEnhancement(ceB)
elif type == 'singlebandgrey':
pass
return style
class QgisTsvBridge(QObject):
"""
Class to control interactions between TSV and a running QGIS instance
"""
_instance = None
@staticmethod
def instance():
return QgisTsvBridge._instance
def __init__(self, iface, TSV):
super(QgisTsvBridge, self).__init__()
assert QgisTsvBridge._instance is None
assert isinstance(TSV, TimeSeriesViewer)
assert isinstance(iface, QgisInterface)
self.iface = iface
self.TSV = TSV
self.ui = self.TSV.ui
self.SpatTempVis = self
self.syncBlocked = False
from timeseriesviewer.ui.widgets import TimeSeriesViewerUI
assert isinstance(self.ui, TimeSeriesViewerUI)
self.cbQgsVectorLayer = self.ui.dockRendering.cbQgsVectorLayer
self.gbQgsVectorLayer = self.ui.dockRendering.gbQgsVectorLayer
self.cbQgsVectorLayer.setEnabled(True)
self.gbQgsVectorLayer.setEnabled(True)
self.qgsMapCanvas = self.iface.mapCanvas()
assert isinstance(self.qgsMapCanvas, QgsMapCanvas)
self.qgsMapCanvas.extentsChanged.connect(self.syncTsvWithQgs)
self.qgsMapCanvas.destinationCrsChanged.connect(self.syncTsvWithQgs)
assert isinstance(self.cbQgsVectorLayer, QgsMapLayerComboBox)
assert isinstance(self.gbQgsVectorLayer, QgsCollapsibleGroupBox)
self.TSV.spatialTemporalVis.sigSpatialExtentChanged.connect(self.syncQgsWithTsv)
self.gbQgsVectorLayer.clicked.connect(self.onQgsVectorLayerChanged)
self.cbQgsVectorLayer.layerChanged.connect(self.onQgsVectorLayerChanged)
self.onQgsVectorLayerChanged(None)
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def syncTsvWithQgs(self, *args):
if self.syncBlocked:
return
syncState = self.ui.dockNavigation.qgsSyncState()
if any(syncState.values()):
self.syncBlocked = True
self.syncBlocked = True
QTimer.singleShot(500, lambda: self.unblock())
tsvExt = self.TSV.spatialTemporalVis.extent
qgsExt = SpatialExtent.fromMapCanvas(self.qgsMapCanvas)
newExtent = self.newExtent(tsvExt, syncState, qgsExt)
self.TSV.spatialTemporalVis.setSpatialExtent(newExtent)
self.syncBlocked = False
pass
def syncQgsWithTsv(self, spatialExtent):
if self.syncBlocked:
return
syncState = self.ui.dockNavigation.qgsSyncState()
if any(syncState.values()):
self.syncBlocked = True
QTimer.singleShot(500, lambda: self.unblock())
tsvExt = self.TSV.spatialTemporalVis.extent
qgsExt = SpatialExtent.fromMapCanvas(self.qgsMapCanvas)
newExtent = self.newExtent(qgsExt, syncState, tsvExt)
self.qgsMapCanvas.setDestinationCrs(newExtent.crs())
self.qgsMapCanvas.setExtent(newExtent)
self.syncBlocked = False
QTimer.singleShot(1000, lambda : self.unblock())
def unblock(self):
self.syncBlocked = False
def newExtent(self, oldExtent, syncState, newExtent):
crs = newExtent.crs() if syncState['crs'] else oldExtent.crs()
extent = oldExtent
if syncState['extent']:
extent = newExtent.toCrs(crs)
elif syncState['center']:
import copy
extent = copy.copy(oldExtent)
extent.setCenter(newExtent.center(), newExtent.crs())
return extent
def onQgsVectorLayerChanged(self, lyr):
if self.gbQgsVectorLayer.isChecked() and \
isinstance(self.cbQgsVectorLayer.currentLayer(), QgsVectorLayer):
self.TSV.spatialTemporalVis.setVectorLayer(self.cbQgsVectorLayer.currentLayer())
else:
self.TSV.spatialTemporalVis.setVectorLayer(None)
def extent(self):
assert isinstance(self.qgsMapCanvas, QgsMapCanvas)
return SpatialExtent.fromMapCanvas(self.qgsMapCanvas)
def syncExtent(self, isChecked):
if isChecked:
self.cbSyncQgsMapCenter.setEnabled(False)
self.cbSyncQgsMapCenter.blockSignals(True)
self.cbSyncQgsMapCenter.setChecked(True)
self.cbSyncQgsMapCenter.blockSignals(False)
else:
self.cbSyncQgsMapCenter.setEnabled(True)
self.qgsSyncStateChanged()
def qgsSyncState(self):
return (self.cbSyncQgsMapCenter.isChecked(),
self.cbSyncQgsMapExtent.isChecked(),
self.cbSyncQgsCRS.isChecked())

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class MapView(QObject):
sigRemoveMapView = pyqtSignal(object)
sigMapViewVisibility = pyqtSignal(bool)
sigVectorVisibility = pyqtSignal(bool)
sigTitleChanged = pyqtSignal(str)
sigSensorRendererChanged = pyqtSignal(SensorInstrument, QgsRasterRenderer)
from timeseriesviewer.crosshair import CrosshairStyle
sigCrosshairStyleChanged = pyqtSignal(CrosshairStyle)
sigShowCrosshair = pyqtSignal(bool)
sigVectorLayerChanged = pyqtSignal()
sigSpatialExtentChanged = pyqtSignal(SpatialExtent)
sigShowProfiles = pyqtSignal(QgsPoint, QgsCoordinateReferenceSystem)
def __init__(self, mapViewCollection, recommended_bands=None, parent=None):
super(MapView, self).__init__()
assert isinstance(mapViewCollection, MapViewCollection)
self.MVC = mapViewCollection
from timeseriesviewer.ui.widgets import MapViewDefinitionUI
self.ui = MapViewDefinitionUI(self, parent=parent)
self.ui.create()
self.setVisibility(True)
self.setVectorLayer(None)
#forward actions with reference to this band view
self.spatialExtent = None
self.ui.actionRemoveMapView.triggered.connect(lambda: self.sigRemoveMapView.emit(self))
self.ui.actionApplyStyles.triggered.connect(self.applyStyles)
self.ui.actionShowCrosshair.toggled.connect(self.setShowCrosshair)
self.ui.sigShowMapView.connect(lambda: self.sigMapViewVisibility.emit(True))
self.ui.sigHideMapView.connect(lambda: self.sigMapViewVisibility.emit(False))
self.ui.sigVectorVisibility.connect(self.sigVectorVisibility.emit)
self.sensorViews = collections.OrderedDict()
self.mSpatialExtent = None
if isinstance(lyr, QgsVectorLayer):
self.vectorLayer.rendererChanged.connect(self.sigVectorLayerChanged)
self.ui.btnVectorOverlayVisibility.setEnabled(True)
self.vectorLayer = None
self.ui.btnVectorOverlayVisibility.setEnabled(False)
self.sigVectorLayerChanged.emit()
def applyStyles(self):
for sensorView in self.sensorViews.values():
sensorView.applyStyle()
s = ""
def setVisibility(self, isVisible):
self.ui.setVisibility(isVisible)
def setSpatialExtent(self, extent):
assert isinstance(extent, SpatialExtent)
self.mSpatialExtent = extent
self.sigSpatialExtentChanged.emit(extent)
def visibility(self):
return self.ui.visibility()
def visibleVectorOverlay(self):
return isinstance(self.vectorLayer, QgsVectorLayer) and \
self.ui.btnVectorOverlayVisibility.isChecked()
def setTitle(self, title):
self.mTitle = title
#self.ui.setTitle('Map View' + title)
self.sigTitleChanged.emit(self.mTitle)
def title(self):
return self.mTitle
def setCrosshairStyle(self, crosshairStyle):
self.sigCrosshairStyleChanged.emit(crosshairStyle)
def setShowCrosshair(self, b):
self.sigShowCrosshair.emit(b)
def removeSensor(self, sensor):
assert type(sensor) is SensorInstrument
if sensor in self.sensorViews.keys():
w = self.sensorViews.pop(sensor)
from timeseriesviewer.ui.widgets import MapViewSensorSettings
assert isinstance(w, MapViewSensorSettings)
l = self.ui.sensorList
l.removeWidget(w.ui)
w.ui.close()
self.ui.adjustSize()
return True
else:
def hasSensor(self, sensor):
assert type(sensor) is SensorInstrument
return sensor in self.sensorViews.keys()
def addSensor(self, sensor):
"""
:param sensor:
:return:
"""
assert type(sensor) is SensorInstrument
assert sensor not in self.sensorViews.keys()
from timeseriesviewer.ui.widgets import MapViewSensorSettings
w = MapViewSensorSettings(sensor)
#w.showSensorName(False)
self.sensorViews[sensor] = w
l = self.ui.sensorList
i = l.count()
l.addWidget(w.ui)
def getSensorWidget(self, sensor):
assert type(sensor) is SensorInstrument
return self.sensorViews[sensor]
class TimeSeriesDatumView(QObject):
sigSpatialExtentChanged = pyqtSignal(SpatialExtent)
sigRenderProgress = pyqtSignal(int,int)
sigLoadingStarted = pyqtSignal(MapView, TimeSeriesDatum)
sigLoadingFinished = pyqtSignal(MapView, TimeSeriesDatum)
sigVisibilityChanged = pyqtSignal(bool)
def __init__(self, TSD, timeSeriesDateViewCollection, mapViewCollection, parent=None):
assert isinstance(TSD, TimeSeriesDatum)
assert isinstance(timeSeriesDateViewCollection, TimeSeriesDateViewCollection)
assert isinstance(mapViewCollection, MapViewCollection)
super(TimeSeriesDatumView, self).__init__()
from timeseriesviewer.ui.widgets import TimeSeriesDatumViewUI
self.ui = TimeSeriesDatumViewUI(parent=parent)
self.ui.create()
self.L = self.ui.layout()
self.wOffset = self.L.count()-1
self.minHeight = self.ui.height()
self.minWidth = 50
self.renderProgress = dict()
self.TSD = TSD
self.scrollArea = timeSeriesDateViewCollection.scrollArea
self.Sensor = self.TSD.sensor
self.TSD.sigVisibilityChanged.connect(self.setVisibility)
self.ui.labelTitle.setText(str(TSD.date))
self.MVC = mapViewCollection
self.TSDVC = timeSeriesDateViewCollection
self.mapCanvases = dict()
self.setSubsetSize(QSize(50, 50))
def setVisibility(self, b):
self.ui.setVisible(b)
self.sigVisibilityChanged.emit(b)
def activateMapTool(self, key):
for c in self.mapCanvases.values():
c.activateMapTool(key)

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def setMapViewVisibility(self, bandView, isVisible):
self.mapCanvases[bandView].setVisible(isVisible)
def setSpatialExtent(self, spatialExtent):
assert isinstance(spatialExtent, SpatialExtent)
for c in self.mapCanvases.values():
c.setSpatialExtent(spatialExtent)
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def setSubsetSize(self, size):
assert isinstance(size, QSize)
assert size.width() > 5 and size.height() > 5
self.subsetSize = size
self.ui.labelTitle.setFixedWidth(size.width())
self.ui.line.setFixedWidth(size.width())
#apply new subset size to existing canvases
for canvas in self.mapCanvases.values():
canvas.setFixedSize(size)
self.adjustBaseMinSize()
def adjustBaseMinSize(self):
self.ui.setFixedSize(self.ui.sizeHint())
def removeMapView(self, mapView):
canvas = self.mapCanvases.pop(mapView)
self.L.removeWidget(canvas)
canvas.close()
self.adjustBaseMinSize()
def refresh(self):
if self.ui.isVisible():
for c in self.mapCanvases.values():
if c.isVisible():
c.refreshAllLayers()
def insertMapView(self, mapView):
assert isinstance(mapView, MapView)
i = self.MVC.index(mapView)
from timeseriesviewer.mapcanvas import TsvMapCanvas
canvas = TsvMapCanvas(self, mapView, parent=self.ui)
canvas.setFixedSize(self.subsetSize)
canvas.extentsChanged.connect(lambda : self.sigSpatialExtentChanged.emit(canvas.spatialExtent()))
canvas.renderStarting.connect(lambda : self.sigLoadingStarted.emit(mapView, self.TSD))
canvas.mapCanvasRefreshed.connect(lambda: self.sigLoadingFinished.emit(mapView, self.TSD))
canvas.sigShowProfiles.connect(mapView.sigShowProfiles.emit)
canvas.sigSpatialExtentChanged.connect(mapView.sigSpatialExtentChanged.emit)

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self.mapCanvases[mapView] = canvas
self.L.insertWidget(self.wOffset + i, canvas)
canvas.refreshMap()
self.adjustBaseMinSize()
return canvas
def __lt__(self, other):
return self.TSD < other.TSD
def __cmp__(self, other):
return cmp(self.TSD, other.TSD)
class SpatialTemporalVisualization(QObject):
"""
"""
sigLoadingStarted = pyqtSignal(TimeSeriesDatumView, MapView)
sigLoadingFinished = pyqtSignal(TimeSeriesDatumView, MapView)
sigShowProfiles = pyqtSignal(QgsPoint, QgsCoordinateReferenceSystem)
sigShowMapLayerInfo = pyqtSignal(dict)
sigSpatialExtentChanged = pyqtSignal(SpatialExtent)
def __init__(self, timeSeriesViewer):
assert isinstance(timeSeriesViewer, TimeSeriesViewer)
super(SpatialTemporalVisualization, self).__init__()
self.ui = timeSeriesViewer.ui
self.scrollArea = self.ui.scrollAreaSubsets
self.TS = timeSeriesViewer.TS
self.targetLayout = self.ui.scrollAreaSubsetContent.layout()
self.dockMapViews = self.ui.dockMapViews
self.MVC = MapViewCollection(self)
self.MVC.sigShowProfiles.connect(self.sigShowProfiles.emit)
self.vectorOverlay = None
self.timeSeriesDateViewCollection = TimeSeriesDateViewCollection(self)
self.timeSeriesDateViewCollection.sigResizeRequired.connect(self.adjustScrollArea)
self.timeSeriesDateViewCollection.sigLoadingStarted.connect(self.ui.dockRendering.addStartedWork)
self.timeSeriesDateViewCollection.sigLoadingFinished.connect(self.ui.dockRendering.addFinishedWork)
self.timeSeriesDateViewCollection.sigSpatialExtentChanged.connect(self.onSpatialExtentChanged)
self.TS.sigTimeSeriesDatesAdded.connect(self.timeSeriesDateViewCollection.addDates)
self.TS.sigTimeSeriesDatesRemoved.connect(self.timeSeriesDateViewCollection.removeDates)
#add dates, if already existing
self.timeSeriesDateViewCollection.addDates(self.TS[:])
self.setSpatialExtent(self.TS.getMaxSpatialExtent())
def setCrosshairStyle(self, crosshairStyle):
self.MVC.setCrosshairStyle(crosshairStyle)
def setShowCrosshair(self, b):
self.MVC.setShowCrosshair(b)
def setVectorLayer(self, lyr):
self.MVC.setVectorLayer(lyr)
def createMapView(self):
self.MVC.createMapView()

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def activateMapTool(self, key):
for tsdv in self.timeSeriesDateViewCollection:

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tsdv.activateMapTool(key)
def setSubsetSize(self, size):
assert isinstance(size, QSize)
self.subsetSize = size
self.timeSeriesDateViewCollection.setSubsetSize(size)
def refresh(self):
for tsdView in self.timeSeriesDateViewCollection:
tsdView.refresh()

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#adjust scroll area widget to fit all visible widgets
m = self.targetLayout.contentsMargins()
n = len(self.timeSeriesDateViewCollection)
w = h = 0
s = QSize()
r = None
tmp = [v for v in self.timeSeriesDateViewCollection if not v.ui.isVisible()]
for TSDView in [v for v in self.timeSeriesDateViewCollection if v.ui.isVisible()]:
s = s + TSDView.ui.sizeHint()
if r is None:
r = TSDView.ui.sizeHint()
if r:
if isinstance(self.targetLayout, QHBoxLayout):
s = QSize(s.width(), r.height())
else:
s = QSize(r.width(), s.height())
s = s + QSize(m.left() + m.right(), m.top() + m.bottom())
self.targetLayout.parentWidget().setFixedSize(s)
def setMaxTSDViews(self, n=-1):
self.nMaxTSDViews = n
#todo: remove views

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def setSpatialExtent(self, extent):
self.timeSeriesDateViewCollection.setSpatialExtent(extent)
self.onSpatialExtentChanged(extent)
def onSpatialExtentChanged(self, extent):
self.extent = extent
self.sigSpatialExtentChanged.emit(extent)
def navigateToTSD(self, TSD):
assert isinstance(TSD, TimeSeriesDatum)
#get widget related to TSD
tsdv = self.timeSeriesDateViewCollection.tsdView(TSD)
assert isinstance(self.scrollArea, QScrollArea)
self.scrollArea.ensureWidgetVisible(tsdv.ui)
def setMapViewVisibility(self, bandView, isVisible):
assert isinstance(bandView, MapView)
assert isinstance(isVisible, bool)
for tsdv in self.TSDViews:
tsdv.setMapViewVisibility(bandView, isVisible)
class TimeSeriesDateViewCollection(QObject):
sigResizeRequired = pyqtSignal()
sigLoadingStarted = pyqtSignal(MapView, TimeSeriesDatum)
sigLoadingFinished = pyqtSignal(MapView, TimeSeriesDatum)
sigShowProfiles = pyqtSignal(QgsPoint, QgsCoordinateReferenceSystem)
sigSpatialExtentChanged = pyqtSignal(QgsRectangle)
def __init__(self, STViz):
assert isinstance(STViz, SpatialTemporalVisualization)
super(TimeSeriesDateViewCollection, self).__init__()
#self.tsv = tsv
#self.timeSeries = tsv.TS
self.views = list()
self.STViz = STViz
self.ui = self.STViz.targetLayout.parentWidget()
self.scrollArea = self.ui.parentWidget().parentWidget()
#potentially there are many more dates than views.
#therefore we implement the addinng/removing of mapviews here
#we reduce the number of layout refresh calls by
#suspending signals, adding the new map view canvases, and sending sigResizeRequired
self.STViz.MVC.sigMapViewAdded.connect(self.addMapView)
self.STViz.MVC.sigMapViewRemoved.connect(self.removeMapView)
self.setFocusView(None)
self.setSubsetSize(QSize(50,50))
def tsdView(self, tsd):
r = [v for v in self.views if v.TSD == tsd]
if len(r) == 1:
return r[0]
else:
raise Exception('TSD not in list')
def addMapView(self, mapView):
assert isinstance(mapView, MapView)
w.setUpdatesEnabled(False)
for tsdv in self.views:
tsdv.ui.setUpdatesEnabled(False)
for tsdv in self.views:
tsdv.insertMapView(mapView)

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for tsdv in self.views:
tsdv.ui.setUpdatesEnabled(True)

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#mapView.sigSensorRendererChanged.connect(lambda *args : self.setRasterRenderer(mapView, *args))
w.setUpdatesEnabled(True)
self.sigResizeRequired.emit()

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def removeMapView(self, mapView):
assert isinstance(mapView, MapView)
for tsdv in self.views:
tsdv.removeMapView(mapView)
self.sigResizeRequired.emit()

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def setFocusView(self, tsd):
self.focusView = tsd
def onSpatialExtentChanged(self, extent):
for tsdview in self.orderedViews():
tsdview.setSpatialExtent(extent)
self.sigSpatialExtentChanged.emit(extent)
def setSpatialExtent(self, extent):
for tsdview in self.orderedViews():
tsdview.setSpatialExtent(extent)
def orderedViews(self):
#returns the
if self.focusView is not None:
assert isinstance(self.focusView, TimeSeriesDatumView)
return sorted(self.views,key=lambda v: np.abs(v.TSD.date - self.focusView.TSD.date))
else:
return self.views

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def setSubsetSize(self, size):
assert isinstance(size, QSize)
self.subsetSize = size
for tsdView in self.orderedViews():
tsdView.blockSignals(True)
for tsdView in self.orderedViews():
tsdView.setSubsetSize(size)

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for tsdView in self.orderedViews():
tsdView.blockSignals(False)

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def addDates(self, tsdList):
"""
Create a new TSDView
:param tsdList:
:return:
"""
for tsd in tsdList:
assert isinstance(tsd, TimeSeriesDatum)
tsdView = TimeSeriesDatumView(tsd, self, self.STViz.MVC, parent=self.ui)
tsdView.setSubsetSize(self.subsetSize)

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tsdView.sigSpatialExtentChanged.connect(self.onSpatialExtentChanged)
tsdView.sigLoadingStarted.connect(self.sigLoadingStarted.emit)
tsdView.sigLoadingFinished.connect(self.sigLoadingFinished.emit)
tsdView.sigVisibilityChanged.connect(lambda: self.STViz.adjustScrollArea())
for i, mapView in enumerate(self.STViz.MVC):
tsdView.insertMapView(mapView)
bisect.insort(self.views, tsdView)
tsdView.ui.setParent(self.STViz.targetLayout.parentWidget())
self.STViz.targetLayout.addWidget(tsdView.ui)
tsdView.ui.show()
if len(tsdList) > 0:
self.sigResizeRequired.emit()
def removeDates(self, tsdList):
toRemove = [v for v in self.views if v.TSD in tsdList]
removedDates = []
for tsdView in toRemove:
self.views.remove(tsdView)
tsdView.ui.parent().layout().removeWidget(tsdView.ui)
tsdView.ui.hide()
tsdView.ui.close()
removedDates.append(tsdView.TSD)
del tsdView
if len(removedDates) > 0:
self.sigResizeRequired.emit()
def __len__(self):
return len(self.views)
def __iter__(self):
return iter(self.views)
def __getitem__(self, slice):
return self.views[slice]
def __delitem__(self, slice):
self.removeDates(self.views[slice])
class MapViewCollection(QObject):
sigMapViewAdded = pyqtSignal(MapView)
sigMapViewRemoved = pyqtSignal(MapView)
sigSetMapViewVisibility = pyqtSignal(MapView, bool)
sigShowProfiles = pyqtSignal(QgsPoint, QgsCoordinateReferenceSystem)
def __init__(self, STViz):
assert isinstance(STViz, SpatialTemporalVisualization)
super(MapViewCollection, self).__init__()
self.STViz = STViz
self.STViz.dockMapViews.actionApplyStyles.triggered.connect(self.applyStyles)
self.STViz.TS.sigSensorAdded.connect(self.addSensor)
self.STViz.TS.sigSensorRemoved.connect(self.removeSensor)
self.ui = STViz.dockMapViews
self.btnList = STViz.dockMapViews.BVButtonList
self.scrollArea = STViz.dockMapViews.scrollAreaMapViews
self.scrollAreaContent = STViz.dockMapViews.scrollAreaMapsViewDockContent
self.mapViewsDefinitions = []
self.mapViewButtons = dict()
self.adjustScrollArea()
def applyStyles(self):
for mapView in self.mapViewsDefinitions:
mapView.applyStyles()
def setCrosshairStyle(self, crosshairStyle):
for mapView in self.mapViewsDefinitions:
mapView.setCrosshairStyle(crosshairStyle)
def setShowCrosshair(self, b):
for mapView in self.mapViewsDefinitions:
mapView.setShowCrosshair(b)
def index(self, mapView):
assert isinstance(mapView, MapView)
return self.mapViewsDefinitions.index(mapView)
def adjustScrollArea(self):
#adjust scroll area widget to fit all visible widgets
l = self.scrollAreaContent.layout()
from timeseriesviewer.ui.widgets import maxWidgetSizes
newSize = maxWidgetSizes(l)
#print(newSize)
#newSize = self.scrollAreaContent.sizeHint()
self.scrollAreaContent.setFixedSize(newSize)
def setVectorLayer(self, lyr):
for mapView in self.mapViewsDefinitions:
assert isinstance(mapView, MapView)
mapView.setVectorLayer(lyr)
def addSensor(self, sensor):
for mapView in self.mapViewsDefinitions:
mapView.addSensor(sensor)
self.adjustScrollArea()
def removeSensor(self, sensor):
for mapView in self.mapViewsDefinitions:
mapView.removeSensor(sensor)

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btn = QToolButton(self.btnList)
self.btnList.layout().insertWidget(self.btnList.layout().count() - 1, btn)
mapView = MapView(self, parent=self.scrollArea)
mapView.sigRemoveMapView.connect(self.removeMapView)
mapView.sigShowProfiles.connect(self.sigShowProfiles.emit)
for sensor in self.STViz.TS.Sensors:
mapView.addSensor(sensor)
self.mapViewButtons[mapView] = btn
self.mapViewsDefinitions.append(mapView)
btn.clicked.connect(lambda : self.showMapViewDefinition(mapView))
self.refreshMapViewTitles()
if len(self) == 1:
self.showMapViewDefinition(mapView)
self.sigMapViewAdded.emit(mapView)
self.adjustScrollArea()
assert isinstance(mapView, MapView)
idx = self.mapViewsDefinitions.index(mapView)

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self.mapViewsDefinitions.remove(mapView)
self.mapViewButtons.pop(mapView)

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btn.setVisible(False)
self.btnList.layout().removeWidget(btn)
l = self.scrollAreaContent.layout()
for d in self.recentMapViewDefinitions():
d.ui.setVisible(False)
l.removeWidget(d.ui)
l.removeWidget(mapView.ui)
mapView.ui.close()

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btn.close()
self.refreshMapViewTitles()
self.sigMapViewRemoved.emit(mapView)
if len(self) > 0:
#show previous mapViewDefinition
idxNext = max([idx-1, 0])
self.showMapViewDefinition(self.mapViewsDefinitions[idxNext])
def refreshMapViewTitles(self):
for i, mapView in enumerate(self.mapViewsDefinitions):
number = i+1
title = '#{}'.format(number)
mapView.setTitle(title)
btn = self.mapViewButtons[mapView]
btn.setText('{}'.format(number))
btn.setToolTip('Show definition for map view {}'.format(number))
btn.setSizePolicy(QSizePolicy.Expanding, QSizePolicy.Fixed)

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def showMapViewDefinition(self, mapViewDefinition):
assert mapViewDefinition in self.mapViewsDefinitions
assert isinstance(mapViewDefinition, MapView)
l = self.scrollAreaContent.layout()

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for d in self.recentMapViewDefinitions():
d.ui.setVisible(False)
l.removeWidget(d.ui)

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l.insertWidget(l.count() - 1, mapViewDefinition.ui)
mapViewDefinition.ui.setVisible(True)
self.ui.setWindowTitle(self.ui.baseTitle + '|'+mapViewDefinition.title())
parent = self.scrollAreaContent
from timeseriesviewer.ui.widgets import MapViewDefinitionUI
return [ui.mapViewDefinition() for ui in parent.findChildren(MapViewDefinitionUI)]
def setMapViewVisibility(self, bandView, isVisible):
assert isinstance(bandView, MapView)

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assert isinstance(isVisible, bool)
def __contains__(self, mapView):
return mapView in self.mapViewsDefinitions
def __init__(self, iface):
"""Constructor.
:param iface: An interface instance that will be passed to this class
which provides the hook by which you can manipulate the QGIS
application at run time.
:type iface: QgsInterface
"""
# Save reference to the QGIS interface
from timeseriesviewer.ui.widgets import TimeSeriesViewerUI
self.ui = TimeSeriesViewerUI()
#init empty time series
self.TS = TimeSeries()
self.hasInitialCenterPoint = False

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self.TS.sigTimeSeriesDatesAdded.connect(self.datesAdded)
#init TS model
D = self.ui
#self.ICP = D.scrollAreaSubsetContent.layout()
#D.scrollAreaMapViews.setSizePolicy(QSizePolicy.MinimumExpanding, QSizePolicy.MinimumExpanding)
#self.BVP = self.ui.scrollAreaMapViews.layout()
D.dockNavigation.connectTimeSeries(self.TS)
D.dockTimeSeries.connectTimeSeries(self.TS)
D.dockSensors.connectTimeSeries(self.TS)
D.dockProfiles.connectTimeSeries(self.TS)
self.spectralTemporalVis = D.dockProfiles
self.spatialTemporalVis = SpatialTemporalVisualization(self)
self.spatialTemporalVis.sigLoadingStarted.connect(self.ui.dockRendering.addStartedWork)
self.spatialTemporalVis.sigLoadingFinished.connect(self.ui.dockRendering.addFinishedWork)
self.spatialTemporalVis.sigShowProfiles.connect(self.spectralTemporalVis.loadCoordinate)
self.spectralTemporalVis.sigMoveToTSD.connect(self.spatialTemporalVis.navigateToTSD)
D.dockNavigation.sigSetSpatialExtent.connect(self.spatialTemporalVis.setSpatialExtent)
self.ValidatorPxX = QIntValidator(0,99999)
self.ValidatorPxY = QIntValidator(0,99999)
#connect actions with logic
#D.btn_showPxCoordinate.clicked.connect(lambda: self.showSubsetsStart())

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D.actionSelectCenter.triggered.connect(lambda : self.spatialTemporalVis.activateMapTool('selectCenter'))
#D.actionSelectArea.triggered.connect(lambda : self.spatialTemporalVis.activateMapTool('selectArea'))

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D.actionZoomMaxExtent.triggered.connect(lambda : self.zoomTo('maxExtent'))
D.actionZoomPixelScale.triggered.connect(lambda: self.zoomTo('pixelScale'))
D.actionZoomIn.triggered.connect(lambda: self.spatialTemporalVis.activateMapTool('zoomIn'))
D.actionZoomOut.triggered.connect(lambda: self.spatialTemporalVis.activateMapTool('zoomOut'))
D.actionPan.triggered.connect(lambda: self.spatialTemporalVis.activateMapTool('pan'))
D.actionIdentifyTimeSeries.triggered.connect(lambda: self.spatialTemporalVis.activateMapTool('identifyProfile'))
D.actionIdentifyMapLayers.triggered.connect(lambda: self.spatialTemporalVis.activateMapTool('identifyMapLayers'))
D.actionAddMapView.triggered.connect(self.spatialTemporalVis.createMapView)
D.actionAddTSD.triggered.connect(lambda : self.addTimeSeriesImages())
D.actionRemoveTSD.triggered.connect(lambda: self.TS.removeDates(self.ui.dockTimeSeries.selectedTimeSeriesDates()))
D.actionRefresh.triggered.connect(self.spatialTemporalVis.refresh)

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D.actionLoadTS.triggered.connect(self.loadTimeSeries)
D.actionClearTS.triggered.connect(self.clearTimeSeries)
D.actionSaveTS.triggered.connect(self.ua_saveTSFile)
D.actionAddTSExample.triggered.connect(self.ua_loadExampleTS)
D.actionShowCrosshair.toggled.connect(self.spatialTemporalVis.setShowCrosshair)

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from timeseriesviewer.ui.widgets import AboutDialogUI, PropertyDialogUI

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D.actionAbout.triggered.connect(lambda: AboutDialogUI(self.ui).exec_())
D.actionSettings.triggered.connect(lambda : PropertyDialogUI(self.ui).exec_())
D.actionFirstTSD.triggered.connect(lambda: self.setDOISliderValue('first'))
D.actionLastTSD.triggered.connect(lambda: self.setDOISliderValue('last'))
D.actionNextTSD.triggered.connect(lambda: self.setDOISliderValue('next'))
D.actionPreviousTSD.triggered.connect(lambda: self.setDOISliderValue('previous'))
D.dockRendering.actionSetSubsetSize.triggered.connect(lambda : self.spatialTemporalVis.setSubsetSize(
D.dockRendering.subsetSize()))
D.actionSetExtent.triggered.connect(lambda: self.spatialTemporalVis.setSpatialExtent(self.ui.spatialExtent()))
self.canvasCrs = QgsCoordinateReferenceSystem()
if iface:
import timeseriesviewer
timeseriesviewer.QGIS_TSV_BRIDGE = QgisTsvBridge(iface, self)
self.ui.setQgsLinkWidgets()
def loadImageFiles(self, files):
assert isinstance(files, list)
self.TS.addFiles(files)
def loadTimeSeries(self, path=None, n_max=None):
if path is None or path is False:
path = QFileDialog.getOpenFileName(self.ui, 'Open Time Series file', '')
if os.path.exists(path):
M = self.ui.dockTimeSeries.tableView_TimeSeries.model()
M.beginResetModel()
self.clearTimeSeries()
self.TS.loadFromFile(path, n_max=n_max)
M.endResetModel()
def zoomTo(self, key):
if key == 'maxExtent':
ext = self.TS.getMaxSpatialExtent(self.ui.dockNavigation.crs())
self.spatialTemporalVis.setSpatialExtent(ext)
elif key == 'pixelScale':
s = ""
def icon(self):
return TimeSeriesViewer.icon()

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if not self.hasInitialCenterPoint:
if len(self.TS.data) > 0:
extent = self.TS.getMaxSpatialExtent()
self.spatialTemporalVis.setSubsetSize(self.ui.dockRendering.subsetSize())
self.spatialTemporalVis.setSpatialExtent(extent)

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self.hasInitialCenterPoint = True
if len(self.spatialTemporalVis.MVC) == 0:
self.spatialTemporalVis.createMapView()
self.spatialTemporalVis.createMapView()

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if len(self.TS.data) == 0:
self.hasInitialCenterPoint = False
def ua_saveTSFile(self):
path = QFileDialog.getSaveFileName(self.ui, caption='Save Time Series file')
if path is not None:
self.TS.saveToFile(path)
def ua_loadExampleTS(self):
from timeseriesviewer import PATH_EXAMPLE_TIMESERIES
if not os.path.exists(PATH_EXAMPLE_TIMESERIES):
QMessageBox.information(self.ui, 'File not found', '{} - this file describes an exemplary time series.'.format(path_example))

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self.loadTimeSeries(path=PATH_EXAMPLE_TIMESERIES)

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self.qgsCanvas.setMapTool(self.RectangleMapTool)

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self.qgsCanvas.setMapTool(self.PointMapTool)

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def setSpatialSubset(self, spatialExtent):
#keep specified CRS but translate extent
oldExtent = self.ui.spatialExtent()
self.spatialTemporalVis.setSpatialExtent(extent)

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def ua_TSprogress(self, v_min, v, v_max):
assert v_min <= v and v <= v_max
P = self.ui.progressBar
if P.minimum() != v_min or P.maximum() != v_max:
P.setRange(v_min, v_max)
else:
s = ""
P.setValue(v)

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def datesAdded(self, dates):
assert isinstance(dates, list)
self.ui.dockTimeSeries.tableView_TimeSeries.resizeColumnsToContents()

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self.timeseriesChanged()
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# noinspection PyMethodMayBeStatic
def tr(self, message):
"""Get the translation for a string using Qt translation API.
We implement this ourselves since we do not inherit QObject.
:param message: String for translation.
:type message: str, QString
:returns: Translated version of message.
:rtype: QString
"""
# noinspection PyTypeChecker,PyArgumentList,PyCallByClass
return QCoreApplication.translate('EnMAPBox', message)
def ua_addTSD_to_QGIS(self, TSD, bands):
"""Removes the plugin menu item and icon """
self.iface.removeToolBarIcon(self.action)
self.ui.show()

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def scrollToDate(self, date_of_interest):

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QApplication.processEvents()
HBar = self.ui.scrollArea_imageChips.horizontalScrollBar()
TSDs = list(self.CHIPWIDGETS.keys())
if len(TSDs) == 0:

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return
#get date INDEX that is closest to requested date
if type(date_of_interest) is str:
date_of_interest = np.datetime64(date_of_interest)
if type(date_of_interest) is np.datetime64:
i_doi = TSDs.index(sorted(TSDs, key=lambda TSD: abs(date_of_interest - TSD.getDate()))[0])
else:
i_doi = date_of_interest

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step = int(float(HBar.maximum()) / (len(TSDs)+1))
HBar.setSingleStep(step)
HBar.setPageStep(step*5)
HBar.setValue(i_doi * step)

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def showSubset(self, renderJob, pixmap):
assert isinstance(renderJob, RenderJob)
chipLabel = self.CHIPWIDGETS[renderJob.TSD][renderJob.destinationId]
chipLabel.setPixmap(pixmap)
chipLabel.setFixedSize(pixmap.size())
chipLabel.update()
s = ""
def ua_collect_date(self, ICL, event):
if self.ui.rb_labeling_activate.isChecked():
txt = self.ui.tb_labeling_text.toPlainText()
reg = re.compile('\d{4}-\d{2}-\d{2}', re.I | re.MULTILINE)
dates = set([np.datetime64(m) for m in reg.findall(txt)])
doi = ICL.TSD.getDate()
if event.button() == Qt.LeftButton:
elif event.button() == Qt.MiddleButton and doi in dates:
dates.remove(doi)
dates = sorted(list(dates))
txt = ' '.join([d.astype(str) for d in dates])
self.ui.tb_labeling_text.setText(txt)
def clearLayoutWidgets(self, L):
if L is not None:
while L.count():
w = L.takeAt(0)
if w.widget():
w.widget().deleteLater()

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QApplication.processEvents()
def addTimeSeriesImages(self, files=None):
if files is None:
files = QFileDialog.getOpenFileNames()
#collect sublayers, if existing
M = self.ui.dockTimeSeries.tableView_TimeSeries.model()
M.beginResetModel()
self.TS.clear()
M.endResetModel()
def getSelectedTSDs(self):
TV = self.ui.tableView_TimeSeries
TVM = TV.model()
return [TVM.getTimeSeriesDatumFromIndex(idx) for idx in TV.selectionModel().selectedRows()]
def disconnect_signal(signal):
while True:
try:
signal.disconnect()
except TypeError:
break
def showRGBData(data):
if False:
pathImg = r'O:\SenseCarbonProcessing\BJ_NOC\01_RasterData\00_VRTs\02_Cutted\2014-07-26_LC82270652014207LGN00_BOA.vrt'
pathMsk = r'O:\SenseCarbonProcessing\BJ_NOC\01_RasterData\00_VRTs\02_Cutted\2014-07-26_LC82270652014207LGN00_Msk.vrt'
if False:
TSD = TimeSeriesDatum(pathImg)
TSD.setMask(pathMsk)
c = [670949.883,-786288.771]
w_x = w_y = 1000 #1km box
srs = TSD.getSpatialReference()
ring = ogr.Geometry(ogr.wkbLinearRing)
import itertools
for x,y in itertools.product([1000, -1000], repeat=2):
ring.AddPoint(c[0]+x, c[1]+y)
ring.AssignSpatialReference(srs)
bb = ogr.Geometry(ogr.wkbPolygon)
bb.AddGeometry(ring)
bb.AssignSpatialReference(srs)
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def getChip3d_OLD(chips, r,g,b, range_r, range_g, range_b):
nl, ns = chips[r].shape
a3d = np.ndarray((3,nl,ns), dtype='float')
rgb_idx = [r,g,b]
ranges = [range_r, range_g, range_b]
for i, rgb_i in enumerate(rgb_idx):
range = ranges[i]
data = chips[rgb_i].astype('float')
data -= range[0]
data *= 255./range[1]
a3d[i,:] = data
np.clip(a3d, 0, 255, out=a3d)
return a3d.astype('uint8')
range_r = [0,500]
range_g = [0,500]
range_b = [0,500]
bands = [3,2,1]
#chipData = TSD.readSpatialChip(bb,bands=bands )
#main.addNumpy(getChip3d(chipData, bands, (range_r, range_g, range_b)))
dirSrcLS = r'O:\SenseCarbonProcessing\BJ_NOC\01_RasterData\00_VRTs\02_Cutted'
filesImgLS = file_search(dirSrcLS, '2014*_BOA.vrt')
filesMsk = file_search(dirSrcLS, '2014*_Msk.vrt')
TS = TimeSeries(imageFiles=filesImgLS, maskFiles=filesMsk)
app=PyQt4.Qt.QApplication([])
dirSrcLS = r'\\141.20.140.107\NAS_Processing\SenseCarbonProcessing\BJ_NOC\01_RasterData\02_CuttedVRT'
dirSrcRE = r'\\141.20.140.91\SAN_RSDBrazil\RapidEye\3A_VRTs'
filesImgRE = file_search(dirSrcRE, '*.vrt', recursive=True)
#filesMsk = file_search(dirSrc, '2014*_Msk.vrt')
S.addTimeSeriesImages(files=filesImgLS[0:2])
S.addTimeSeriesImages(files=filesImgRE[0:2])
#S.ua_addTSImages(files=filesImgLS)
#S.ua_addTSImages(files=filesImgRE)
#S.ua_addTSMasks(files=filesMsk)
#S.ua_addView(bands=[4,5,3])
if False:
import qgis.core
# supply path to where is your qgis installed
#QgsApplication.setPrefixPath("/Applications/QGIS_2.12.app/Contents/MacOS/QGIS", True)
# load providers
QgsApplication.initQgis()
a = QgsApplication([], True)
dirSrcLS = r'O:\SenseCarbonProcessing\BJ_NOC\01_RasterData\00_VRTs\02_Cutted'
filesImgLS = file_search(dirSrcLS, '2014*_BOA.vrt')
filesMsk = file_search(dirSrcLS, '2014*_Msk.vrt')
S.addTimeSeriesImages(files=filesImgLS)
S.ua_addTSMasks(files=filesMsk)
if __name__ == '__main__':