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self.mPlotSettings.sort(key = lambda sv:sv.sensor().name(), reverse=r)
elif colName == self.cnExpression:
self.mPlotSettings.sort(key=lambda sv: sv.expression(), reverse=r)
elif colName == self.cnStyle:
self.mPlotSettings.sort(key=lambda sv: sv.color, reverse=r)
def rowCount(self, parent = QModelIndex()):
return len(self.mPlotSettings)
def removeRows(self, row, count , parent = QModelIndex()):
for tsd in toRemove:
self.endRemoveRows()
assert isinstance(plotStyle, TemporalProfile2DPlotStyle)
if plotStyle in self.mPlotSettings:
i = self.mPlotSettings.index(plotStyle)
return self.createIndex(i, 0)
else:
return QModelIndex()
def idx2plotStyle(self, index):
if index.isValid() and index.row() < self.rowCount():
return self.mPlotSettings[index.row()]
return None
def columnCount(self, parent = QModelIndex()):
def data(self, index, role = Qt.DisplayRole):
if role is None or not index.isValid():
return None
value = None
columnName = self.columnNames[index.column()]
if isinstance(plotStyle, TemporalProfile2DPlotStyle):
sensor = plotStyle.sensor()
#print(('data', columnName, role))
if role == Qt.DisplayRole:
if columnName == self.cnSensor:
if isinstance(sensor, SensorInstrument):
value = sensor.name()
else:
value = '<Select Sensor>'
elif columnName == self.cnExpression:
value = plotStyle.expression()
elif columnName == self.cnTemporalProfile:
tp = plotStyle.temporalProfile()
if isinstance(tp, TemporalProfile):
value = tp.name()
else:
value = 'undefined'
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#elif role == Qt.DecorationRole:
# if columnName == self.cnStyle:
# value = plotStyle.createIcon(QSize(96,96))
elif role == Qt.CheckStateRole:
if columnName == self.cnTemporalProfile:
value = Qt.Checked if plotStyle.isVisible() else Qt.Unchecked
elif role == Qt.UserRole:
value = plotStyle
if columnName == self.cnSensor:
value = plotStyle.sensor()
elif columnName == self.cnExpression:
value = plotStyle.expression()
elif columnName == self.cnStyle:
value = plotStyle
elif columnName == self.cnTemporalProfile:
value == plotStyle.temporalProfile()
else:
value = plotStyle
#print(('get data',value))
return value
def setData(self, index, value, role=None):
if role is None or not index.isValid():
return False
#print(('Set data', index.row(), index.column(), value, role))
columnName = self.columnNames[index.column()]
result = False
plotStyle = self.idx2plotStyle(index)
if isinstance(plotStyle, TemporalProfile2DPlotStyle):
if role in [Qt.DisplayRole]:
if columnName == self.cnExpression:
plotStyle.setExpression(value)

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plotStyle.updateDataProperties()
result = True
elif columnName == self.cnStyle:
if isinstance(value, PlotStyle):

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plotStyle.updateStyleProperties()
result = True
if role == Qt.CheckStateRole:
if columnName == self.cnTemporalProfile:
plotStyle.setVisibility(value == Qt.Checked)
result = True
if role == Qt.EditRole:
if columnName == self.cnExpression:
plotStyle.setExpression(value)

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result = True
elif columnName == self.cnStyle:
plotStyle.copyFrom(value)
result = True
elif columnName == self.cnSensor:
plotStyle.setSensor(value)
result = True
elif columnName == self.cnTemporalProfile:
plotStyle.setTemporalProfile(value)
result = True
if result:
#save plot-style
self.dataChanged.emit(index, index)
return result
def savePlotSettings(self, sensorPlotSettings, index='DEFAULT'):
def restorePlotSettings(self, sensor, index='DEFAULT'):
def flags(self, index):
if index.isValid():
columnName = self.columnNames[index.column()]
flags = Qt.ItemIsEnabled | Qt.ItemIsSelectable
flags = flags | Qt.ItemIsUserCheckable
if columnName in [self.cnTemporalProfile, self.cnSensor, self.cnExpression, self.cnStyle]: #allow check state
flags = flags | Qt.ItemIsEditable
return flags
#return item.qt_flags(index.column())
return Qt.NoItemFlags
def headerData(self, col, orientation, role):
if Qt is None:
return None
if orientation == Qt.Horizontal and role == Qt.DisplayRole:
elif orientation == Qt.Vertical and role == Qt.DisplayRole:
return col
return None
class ProfileViewDockUI(QgsDockWidget, loadUI('profileviewdock.ui')):
def __init__(self, parent=None):
super(ProfileViewDockUI, self).__init__(parent)
self.setupUi(self)
self.addActions(self.findChildren(QAction))
self.mActions2D = [self.actionAddStyle2D, self.actionRemoveStyle2D, self.actionRefresh2D, self.actionReset2DPlot]
self.mActions3D = [self.actionAddStyle3D, self.actionRemoveStyle3D, self.actionRefresh3D,
self.actionReset3DCamera]
self.mActionsTP = [self.actionLoadTPFromOgr, self.actionSaveTemporalProfiles, self.actionToggleEditing,
self.actionRemoveTemporalProfile, self.actionLoadMissingValues]
#self.line.setVisible(False)
#self.listWidget.setVisible(False)

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self.baseTitle = self.windowTitle()
self.stackedWidget.currentChanged.connect(self.onStackPageChanged)

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self.plotWidget3DMPL = None
#pi = self.plotWidget2D.plotItem
#ax = DateAxis(orientation='bottom', showValues=True)
#pi.layout.addItem(ax, 3,2)

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self.TS = None
self.progressBar.setMinimum(0)
self.progressBar.setMaximum(100)
self.progressBar.setValue(0)
self.progressInfo.setText('')
self.pxViewModel2D = None
self.pxViewModel3D = None
self.tableView2DProfiles.horizontalHeader().setResizeMode(QHeaderView.Interactive)

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l = self.frame3DPlot.layout()
if ENABLE_OPENGL and OPENGL_AVAILABLE and mode == 'gl':
from eotimeseriesviewer.temporalprofiles3dGL import ViewWidget3D
self.plotWidget3D = ViewWidget3D(parent=self.labelDummy3D.parent())
self.plotWidget3D.setObjectName('plotWidget3D')
size = self.labelDummy3D.size()
l.addWidget(self.plotWidget3D)
self.plotWidget3D.setSizePolicy(self.labelDummy3D.sizePolicy())
self.labelDummy3D.setVisible(False)
l.removeWidget(self.labelDummy3D)
self.splitter3D.setSizes([100, 100])
else:
self.frameSettings3D.setEnabled(False)

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def onStackPageChanged(self, i):
w = self.stackedWidget.currentWidget()
title = self.baseTitle
if w == self.page2D:
title = '{} | 2D'.format(title)
for a in self.mActions2D:
a.setVisible(True)
for a in self.mActions3D + self.mActionsTP:

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elif w == self.page3D:
title = '{} | 3D (experimental!)'.format(title)
for a in self.mActions2D + self.mActionsTP:
a.setVisible(False)
for a in self.mActions3D:
a.setVisible(True)

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elif w == self.pagePixel:
title = '{} | Coordinates'.format(title)
for a in self.mActions2D + self.mActions3D:
a.setVisible(False)
for a in self.mActionsTP:
a.setVisible(True)

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self.setWindowTitle(title)
class SpectralTemporalVisualization(QObject):
sigShowPixel = pyqtSignal(TimeSeriesDatum, QgsPoint, QgsCoordinateReferenceSystem)
"""
Signalizes to move to specific date of interest
"""
sigMoveToDate = pyqtSignal(np.datetime64)
def __init__(self, timeSeries, profileDock):
super(SpectralTemporalVisualization, self).__init__()
assert isinstance(profileDock, ProfileViewDockUI)
self.ui = profileDock
import eotimeseriesviewer.pixelloader
eotimeseriesviewer.pixelloader.DEBUG = True
assert isinstance(timeSeries, TimeSeries)
self.TS = timeSeries
self.plot_initialized = False
self.plot2D.getViewBox().sigMoveToDate.connect(self.sigMoveToDate)
# temporal profile collection to store loaded values
self.mTemporalProfileLayer = TemporalProfileLayer(self.TS)
self.mTemporalProfileLayer.sigTemporalProfilesAdded.connect(self.onTemporalProfilesAdded)
self.mTemporalProfileLayer.startEditing()
self.mTemporalProfileLayer.selectionChanged.connect(self.onTemporalProfileSelectionChanged)
# fix to not loose C++ reference on temporal profile layer in case it is removed from QGIS mapcanvas
self.mMapCanvas = QgsMapCanvas()
self.mMapCanvas.setVisible(False)
self.mMapCanvas.setLayers([self.mTemporalProfileLayer])
# self.tpCollectionListModel = TemporalProfileCollectionListModel(self.tpCollection)
assert isinstance(self.ui.mDualView, QgsDualView)
self.ui.mDualView.init(self.mTemporalProfileLayer, self.mMapCanvas)
# pixel loader to load pixel values in parallel
config = QgsAttributeTableConfig()
config.update(self.mTemporalProfileLayer.fields())
config.setActionWidgetVisible(True)
hidden = [FN_ID]
for i, columnConfig in enumerate(config.columns()):
assert isinstance(columnConfig, QgsAttributeTableConfig.ColumnConfig)
config.setColumnHidden(i, columnConfig.name in hidden)
self.mTemporalProfilesTableConfig = config
self.mTemporalProfileLayer.setAttributeTableConfig(self.mTemporalProfilesTableConfig)
self.pixelLoader = PixelLoader()
self.pixelLoader.sigPixelLoaded.connect(self.onPixelLoaded)
self.pixelLoader.sigLoadingStarted.connect(lambda: self.ui.progressInfo.setText('Start loading...'))
# self.pixelLoader.sigLoadingStarted.connect(self.tpCollection.prune)
self.pixelLoader.sigLoadingFinished.connect(lambda: self.plot2D.enableAutoRange('x', False))
self.plotSettingsModel2D = PlotSettingsModel2D()
self.ui.tableView2DProfiles.setModel(self.plotSettingsModel2D)
self.ui.tableView2DProfiles.setSortingEnabled(False)
self.ui.tableView2DProfiles.selectionModel().selectionChanged.connect(self.onPlot2DSelectionChanged)
self.ui.tableView2DProfiles.horizontalHeader().setResizeMode(QHeaderView.Interactive)
self.plotSettingsModel2D.sigDataChanged.connect(self.requestUpdate)
self.plotSettingsModel2D.rowsInserted.connect(self.onRowsInserted2D)
self.delegateTableView2D = PlotSettingsModel2DWidgetDelegate(self.ui.tableView2DProfiles, self.mTemporalProfileLayer)
self.delegateTableView2D.setItemDelegates(self.ui.tableView2DProfiles)
# set the plot models for 3D
self.plotSettingsModel3D = PlotSettingsModel3D()
self.ui.tableView3DProfiles.setModel(self.plotSettingsModel3D)
self.ui.tableView3DProfiles.setSortingEnabled(False)
self.ui.tableView2DProfiles.selectionModel().selectionChanged.connect(self.onPlot3DSelectionChanged)
self.ui.tableView3DProfiles.horizontalHeader().setResizeMode(QHeaderView.Interactive)
self.plotSettingsModel3D.rowsInserted.connect(self.onRowsInserted3D)
self.delegateTableView3D = PlotSettingsModel3DWidgetDelegate(self.ui.tableView3DProfiles, self.mTemporalProfileLayer)
self.delegateTableView3D.setItemDelegates(self.ui.tableView3DProfiles)
if not ENABLE_OPENGL:
self.ui.listWidget.item(1).setHidden(True)
self.ui.page3D.setHidden(True)
def onTemporalProfilesRemoved(removedProfiles):
#set to valid temporal profile
affectedStyles2D = [p for p in self.plotSettingsModel2D if p.temporalProfile() in removedProfiles]
affectedStyles3D = [p for p in self.plotSettingsModel3D if p.temporalProfile() in removedProfiles]
alternativeProfile = self.mTemporalProfileLayer[-1] if len(self.mTemporalProfileLayer) > 0 else None
for s in affectedStyles2D:
assert isinstance(s, TemporalProfile2DPlotStyle)
m = self.plotSettingsModel2D
idx = m.plotStyle2idx(s)
idx = m.createIndex(idx.row(), m.columnNames.index(m.cnTemporalProfile))
m.setData(idx, alternativeProfile, Qt.EditRole)
for s in affectedStyles3D:
assert isinstance(s, TemporalProfile3DPlotStyle)
m = self.plotSettingsModel3D
idx = m.plotStyle2idx(s)
idx = m.createIndex(idx.row(), m.columnNames.index(m.cnTemporalProfile))
m.setData(idx, alternativeProfile, Qt.EditRole)
self.mTemporalProfileLayer.sigTemporalProfilesRemoved.connect(onTemporalProfilesRemoved)
# remove / add plot style
def on2DPlotStyleRemoved(plotStyles):
for plotStyle in plotStyles:
assert isinstance(plotStyle, PlotStyle)
for pi in plotStyle.mPlotItems:
for plotStyle in plotStyles:
assert isinstance(plotStyle, TemporalProfile3DPlotStyle)
toRemove.append(plotStyle.mPlotItems)
self.plot3D.removeItems(toRemove)
self.plotSettingsModel2D.sigPlotStylesRemoved.connect(on2DPlotStyleRemoved)
self.plotSettingsModel3D.sigPlotStylesRemoved.connect(on3DPlotStyleRemoved)
self.updateRequested = True
self.updateTimer = QTimer(self)
self.updateTimer.timeout.connect(self.onDataUpdate)
self.updateTimer.start(2000)
self.sigMoveToDate.connect(self.onMoveToDate)
#self.ui.stackedWidget.setCurrentPage(self.ui.pagePixel)
self.ui.onStackPageChanged(self.ui.stackedWidget.currentIndex())
"""
Returns a QgsVectorLayer that is used to store profile coordinates.
:return:
"""
return self.mTemporalProfileLayer

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def onTemporalProfilesContextMenu(self, event):
assert isinstance(event, QContextMenuEvent)
tableView = self.ui.tableViewTemporalProfiles
selectionModel = self.ui.tableViewTemporalProfiles.selectionModel()
assert isinstance(selectionModel, QItemSelectionModel)
model = self.ui.tableViewTemporalProfiles.model()
assert isinstance(model, TemporalProfileLayer)

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temporalProfiles = []
if len(selectionModel.selectedIndexes()) > 0:
for idx in selectionModel.selectedIndexes():
tp = model.idx2tp(idx)
if isinstance(tp, TemporalProfile) and not tp in temporalProfiles:
temporalProfiles.append(tp)

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temporalProfiles = model[:]
spatialPoints = [tp.coordinate() for tp in temporalProfiles]
menu = QMenu()
a = menu.addAction('Load missing')
a.setToolTip('Loads missing band-pixels.')
a.triggered.connect(lambda : self.loadCoordinate(spatialPoints=spatialPoints, mode='all'))
s = ""
a = menu.addAction('Reload')
a.setToolTip('Reloads all band-pixels.')
a.triggered.connect(lambda: self.loadCoordinate(spatialPoints=spatialPoints, mode='reload'))
menu.popup(tableView.viewport().mapToGlobal(event.pos()))
self.menu = menu
def selected2DPlotStyles(self):
result = []
m = self.ui.tableView2DProfiles.model()
for idx in selectedModelIndices(self.ui.tableView2DProfiles):
result.append(m.idx2plotStyle(idx))
return result
m = self.ui.tableView2DProfiles.model()
m.removePlotStyles(plotStyles)
self.mTemporalProfileLayer.selectByIds(fids)
b = self.mTemporalProfileLayer.isEditable()
self.mTemporalProfileLayer.startEditing()
self.mTemporalProfileLayer.deleteSelectedFeatures()
self.mTemporalProfileLayer.saveEdits(leaveEditable=b)
def createNewPlotStyle2D(self):
l = len(self.mTemporalProfileLayer)

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plotStyle.sigExpressionUpdated.connect(self.updatePlot2D)
if len(sensors) > 0:
plotStyle.setSensor(sensors[0])
if len(self.mTemporalProfileLayer) > 0:
temporalProfile = self.mTemporalProfileLayer[0]
plotStyle.setTemporalProfile(temporalProfile)
if len(self.plotSettingsModel2D) > 0:
lastStyle = self.plotSettingsModel2D[0] #top style in list is the most-recent
assert isinstance(lastStyle, TemporalProfile2DPlotStyle)
markerColor = nextColor(lastStyle.markerBrush.color())
plotStyle.markerBrush.setColor(markerColor)
self.plotSettingsModel2D.insertPlotStyles([plotStyle], i=0)
pdi = plotStyle.createPlotItem(self.plot2D)
assert isinstance(pdi, TemporalProfilePlotDataItem)
pdi.sigClicked.connect(self.onProfileClicked2D)
pdi.sigPointsClicked.connect(self.onPointsClicked2D)

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self.plot2D.plotItem.addItem(pdi)
#self.plot2D.getPlotItem().addItem(pg.PlotDataItem(x=[1, 2, 3], y=[1, 2, 3]))
#plotItem.addDataItem(pdi)
#plotItem.plot().sigPlotChanged.emit(plotItem)
self.updatePlot2D()

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return plotStyle
def createNewPlotStyle3D(self):
if not (ENABLE_OPENGL and OPENGL_AVAILABLE):
plotStyle = TemporalProfile3DPlotStyle()
plotStyle.sigExpressionUpdated.connect(self.updatePlot3D)
if len(self.mTemporalProfileLayer) > 0:
temporalProfile = self.mTemporalProfileLayer[0]
plotStyle.setTemporalProfile(temporalProfile)
if len(self.plotSettingsModel3D) > 0:
color = self.plotSettingsModel3D[-1].color()
plotStyle.setColor(nextColor(color))
if len(sensors) > 0:
plotStyle.setSensor(sensors[0])
self.plotSettingsModel3D.insertPlotStyles([plotStyle], i=0) # latest to the top
plotItems = plotStyle.createPlotItem()
self.plot3D.addItems(plotItems)
#self.updatePlot3D()

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def onProfileClicked2D(self, pdi):
if isinstance(pdi, TemporalProfilePlotDataItem):
sensor = pdi.mPlotStyle.sensor()
tp = pdi.mPlotStyle.temporalProfile()
if isinstance(tp, TemporalProfile) and isinstance(sensor, SensorInstrument):
c = tp.coordinate()

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info = ['Sensor:{}'.format(sensor.name()),
'Coordinate:{}, {}'.format(c.x(), c.y())]

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self.ui.tbInfo2D.setPlainText('\n'.join(info))
def onPointsClicked2D(self, pdi, spottedItems):
if isinstance(pdi, TemporalProfilePlotDataItem) and isinstance(spottedItems, list):
sensor = pdi.mPlotStyle.sensor()
tp = pdi.mPlotStyle.temporalProfile()
if isinstance(tp, TemporalProfile) and isinstance(sensor, SensorInstrument):
c = tp.coordinate()

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info = ['Sensor: {}'.format(sensor.name()),
'Coordinate: {}, {}'.format(c.x(), c.y())]

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for item in spottedItems:
pos = item.pos()
x = pos.x()
y = pos.y()
date = num2date(x)
info.append('Date: {}\nValue: {}'.format(date, y))
self.ui.tbInfo2D.setPlainText('\n'.join(info))
def onTemporalProfilesAdded(self, profiles):
for plotStyle in self.plotSettingsModel3D:
assert isinstance(plotStyle, TemporalProfilePlotStyleBase)
if not isinstance(plotStyle.temporalProfile(), TemporalProfile):
r = self.plotSettingsModel3D.plotStyle2idx(plotStyle).row()
c = self.plotSettingsModel3D.columnIndex(self.plotSettingsModel3D.cnTemporalProfile)
self.plotSettingsModel3D.setData(idx, self.mTemporalProfileLayer[0])
def onTemporalProfileSelectionChanged(self, selectedFIDs, deselectedFIDs):
nSelected = len(selectedFIDs)

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self.ui.actionRemoveTemporalProfile.setEnabled(nSelected > 0)
def onPlot2DSelectionChanged(self, selected, deselected):
self.ui.actionRemoveStyle2D.setEnabled(len(selected) > 0)
def onPlot3DSelectionChanged(self, selected, deselected):
self.ui.actionRemoveStyle3D.setEnabled(len(selected) > 0)
self.ui.actionRemoveStyle2D.setEnabled(False)
self.ui.actionRemoveTemporalProfile.setEnabled(False)
self.ui.actionAddStyle2D.triggered.connect(self.createNewPlotStyle2D)
self.ui.actionAddStyle3D.triggered.connect(self.createNewPlotStyle3D)
self.ui.actionRefresh2D.triggered.connect(self.updatePlot2D)
self.ui.actionRefresh3D.triggered.connect(self.updatePlot3D)
self.ui.actionRemoveStyle2D.triggered.connect(lambda:self.removePlotStyles2D(self.selected2DPlotStyles()))
self.ui.actionRemoveTemporalProfile.triggered.connect(lambda :self.removeTemporalProfiles(self.mTemporalProfileLayer.selectedFeatureIds()))
self.ui.actionToggleEditing.triggered.connect(self.onToggleEditing)
self.ui.actionReset2DPlot.triggered.connect(self.plot2D.resetViewBox)
self.plot2D.resetTransform()
self.ui.actionReset3DCamera.triggered.connect(self.reset3DCamera)
self.ui.actionLoadTPFromOgr.triggered.connect(lambda : self.mTemporalProfileLayer.loadCoordinatesFromOgr(None))
self.ui.actionLoadMissingValues.triggered.connect(lambda: self.loadMissingData())
self.ui.actionSaveTemporalProfiles.triggered.connect(self.mTemporalProfileLayer.saveTemporalProfiles)
#set actions to be shown in the TemporalProfileTableView context menu
ma = [self.ui.actionSaveTemporalProfiles, self.ui.actionLoadMissingValues]

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self.onEditingToggled()
def onSaveTemporalProfiles(self):
s = ""
def onToggleEditing(self, b):
if self.mTemporalProfileLayer.isEditable():
self.mTemporalProfileLayer.saveEdits(leaveEditable=False)
else:
self.mTemporalProfileLayer.startEditing()
self.onEditingToggled()
def onEditingToggled(self):
lyr = self.mTemporalProfileLayer
hasSelectedFeatures = lyr.selectedFeatureCount() > 0
isEditable = lyr.isEditable()
self.ui.actionToggleEditing.blockSignals(True)
self.ui.actionToggleEditing.setChecked(isEditable)
#self.actionSaveTemporalProfiles.setEnabled(isEditable)
#self.actionReload.setEnabled(not isEditable)
self.ui.actionToggleEditing.blockSignals(False)
#self.actionAddAttribute.setEnabled(isEditable)
#self.actionRemoveAttribute.setEnabled(isEditable)
self.ui.actionRemoveTemporalProfile.setEnabled(isEditable and hasSelectedFeatures)
#self.actionPasteFeatures.setEnabled(isEditable)
self.ui.actionToggleEditing.setEnabled(not lyr.readOnly())

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if ENABLE_OPENGL and OPENGL_AVAILABLE:
self.ui.actionReset3DCamera.trigger()
def onMoveToDate(self, date):
dt = np.asarray([np.abs(tsd.date - date) for tsd in self.TS])
i = np.argmin(dt)
self.sigMoveToTSD.emit(self.TS[i])
bn = os.path.basename(d.sourcePath)
if d.success():
t = 'Loaded {} pixel from {}.'.format(len(d.resProfiles), bn)
self.mTemporalProfileLayer.addPixelLoaderResult(d)
self.updateRequested = True
else:
t = 'Failed loading from {}.'.format(bn)
if d.info and d.info != '':
t += '({})'.format(d.info)
# QgsApplication.processEvents()
self.ui.progressInfo.setText(t)
def requestUpdate(self, *args):
self.updateRequested = True
#next time
def onRowsInserted2D(self, parent, start, end):
model = self.ui.tableView2DProfiles.model()
if isinstance(model, PlotSettingsModel2D):
colExpression = model.columnIndex(model.cnExpression)
colStyle = model.columnIndex(model.cnStyle)
while start <= end:
idxExpr = model.createIndex(start, colExpression)
idxStyle = model.createIndex(start, colStyle)
self.ui.tableView2DProfiles.openPersistentEditor(idxExpr)
self.ui.tableView2DProfiles.openPersistentEditor(idxStyle)
start += 1
def onRowsInserted3D(self, parent, start, end):
model = self.ui.tableView3DProfiles.model()
if isinstance(model, PlotSettingsModel3D):
colExpression = model.columnIndex(model.cnExpression)
colStyle = model.columnIndex(model.cnStyle)
while start <= end:
idxStyle = model.createIndex(start, colStyle)
idxExpr = model.createIndex(start, colExpression)
self.ui.tableView3DProfiles.openPersistentEditor(idxStyle)
self.ui.tableView3DProfiles.openPersistentEditor(idxExpr)
def onObservationClicked(self, plotDataItem, points):
for p in points:
tsd = p.data()
def loadMissingData(self, backgroundProcess=False):

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"""
Loads all band values of collected locations that have not been loaded until now
"""
fids = self.mTemporalProfileLayer.selectedFeatureIds()
if len(fids) == 0:
fids = [f.id() for f in self.mTemporalProfileLayer.getFeatures()]
tps = [self.mTemporalProfileLayer.mProfiles.get(fid) for fid in fids]
spatialPoints = [tp.coordinate() for tp in tps if isinstance(tp, TemporalProfile)]

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self.loadCoordinate(spatialPoints=spatialPoints, mode='all', backgroundProcess=backgroundProcess)
def loadCoordinate(self, spatialPoints=None, LUT_bandIndices=None, mode='missing', backgroundProcess = True):
"""
:param spatialPoints: [list-of-geometries] to load pixel values from
:param LUT_bandIndices: dictionary {sensor:[indices]} with band indices to be loaded per sensor
:param mode:
:return:
"""
"""
Loads a temporal profile for a single or multiple geometries.
:param spatialPoints: SpatialPoint | [list-of-SpatialPoints]
"""
assert mode in SpectralTemporalVisualization.LOADING_MODES
if not isinstance(self.plotSettingsModel2D, PlotSettingsModel2D):
assert isinstance(self.TS, TimeSeries)
# Get or create the TimeSeriesProfiles which will store the loaded values
# Define which (new) bands need to be loaded for each sensor
if LUT_bandIndices is None:
LUT_bandIndices = dict()
LUT_bandIndices[sensor] = list(range(sensor.nb))
else:
LUT_bandIndices[sensor] = self.plotSettingsModel2D.requiredBandsIndices(sensor)
assert isinstance(LUT_bandIndices, dict)
assert sensor in LUT_bandIndices.keys()
#update new / existing points
if isinstance(spatialPoints, SpatialPoint):
spatialPoints = [spatialPoints]
for spatialPoint in spatialPoints:
assert isinstance(spatialPoint, SpatialPoint)
TP = self.mTemporalProfileLayer.fromSpatialPoint(spatialPoint)
# if not TP exists for this point, create an empty one
TP = self.mTemporalProfileLayer.createTemporalProfiles(spatialPoint)[0]
if len(self.mTemporalProfileLayer) == 1:
if len(self.plotSettingsModel2D) == 0:
self.createNewPlotStyle2D()
if len(self.plotSettingsModel3D) == 0:
theGeometries.append(TP.coordinate())
TP_ids = [TP.id() for TP in TPs]
for tsd in self.TS:
# which bands do we need to load?
requiredIndices = set(LUT_bandIndices[tsd.sensor()])
if mode == 'missing':
missingIndices = set()
for TP in TPs:
assert isinstance(TP, TemporalProfile)
need2load = TP.missingBandIndices(tsd, requiredIndices=requiredIndices)
missingIndices = missingIndices.union(need2load)
missingIndices = sorted(list(missingIndices))
else:
missingIndices = requiredIndices
for pathImg in tsd.sourceUris():
task = PixelLoaderTask(pathImg, theGeometries,
bandIndices=missingIndices,
temporalProfileIDs=TP_ids)
tasks.append(task)
if len(tasks) > 0:
aGoodDefault = 2 if len(self.TS) > 25 else 1
if DEBUG:
print('Start loading for {} geometries from {} sources...'.format(
len(theGeometries), len(tasks)
))

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if backgroundProcess:
self.pixelLoader.startLoading(tasks)
else:
import eotimeseriesviewer.pixelloader
tasks = [PixelLoaderTask.fromDump(eotimeseriesviewer.pixelloader.doLoaderTask(None, task.toDump())) for task in tasks]

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l = len(tasks)
for i, task in enumerate(tasks):
else:
if DEBUG:
print('Data for geometries already loaded')
for plotSetting in self.plotSettingsModel2D:
assert isinstance(plotSetting, TemporalProfile2DPlotStyle)
tp = plotSetting.temporalProfile()
for pdi in plotSetting.mPlotItems:
assert isinstance(pdi, TemporalProfilePlotDataItem)
pdi.updateDataAndStyle()
if isinstance(tp, TemporalProfile) and plotSetting.temporalProfile().updated():

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plotSetting.temporalProfile().resetUpdatedFlag()

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for i in self.plot2D.plotItem.dataItems:

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notInit = [0, 1] == self.plot2D.plotItem.getAxis('bottom').range
if notInit:
for plotSetting in self.plotSettingsModel2D:
assert isinstance(plotSetting, TemporalProfile2DPlotStyle)
for pdi in plotSetting.mPlotItems:
assert isinstance(pdi, TemporalProfilePlotDataItem)
if pdi.xData.ndim == 0 or pdi.xData.shape[0] == 0:
continue
if x0 is None:
x0 = pdi.xData.min()
x1 = pdi.xData.max()
else:
x0 = min(pdi.xData.min(), x0)
x1 = max(pdi.xData.max(), x1)
if x0 is not None:
self.plot2D.plotItem.setXRange(x0, x1)
@QtCore.pyqtSlot()
def updatePlot3D(self):
if ENABLE_OPENGL and OPENGL_AVAILABLE:
from eotimeseriesviewer.temporalprofiles3dGL import ViewWidget3D
assert isinstance(self.plot3D, ViewWidget3D)
# 1. ensure that data from all bands will be loaded
# new loaded values will be shown in the next updatePlot3D call
for plotStyle3D in self.plotSettingsModel3D:
assert isinstance(plotStyle3D, TemporalProfile3DPlotStyle)
coordinates.append(plotStyle3D.temporalProfile().coordinate())
self.loadCoordinate(coordinates, mode='all')
toRemove = [item for item in self.plot3D.items if item not in allPlotItems]
self.plot3D.removeItems(toRemove)
toAdd = [item for item in allPlotItems if item not in self.plot3D.items]
self.plot3D.addItems(toAdd)
# 3. add new plot items
for plotStyle3D in self.plotSettingsModel3D:
assert isinstance(plotStyle3D, TemporalProfile3DPlotStyle)
items = plotStyle3D.createPlotItem(None)
plotItems.extend(items)
self.plot3D.addItems(plotItems)
self.plot3D.updateDataRanges()
self.plot3D.resetScaling()
@QtCore.pyqtSlot()
def updatePlot2D(self):
if isinstance(self.plotSettingsModel2D, PlotSettingsModel2D):
for plotStyle in self.plotSettingsModel2D:
assert isinstance(plotStyle, TemporalProfile2DPlotStyle)
if plotStyle.isPlotable():
locations.add(plotStyle.temporalProfile().coordinate())
for pdi in plotStyle.mPlotItems:
assert isinstance(pdi, TemporalProfilePlotDataItem)
pdi.updateDataAndStyle()
#2. load pixel data
self.loadCoordinate(list(locations))
# https://github.com/pyqtgraph/pyqtgraph/blob/5195d9dd6308caee87e043e859e7e553b9887453/examples/customPlot.py
return
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# prepare QGIS environment
if sys.platform == 'darwin':
PATH_QGS = r'/Applications/QGIS.app/Contents/MacOS'
os.environ['GDAL_DATA'] = r'/usr/local/Cellar/gdal/1.11.3_1/share'
else:
# assume OSGeo4W startup
PATH_QGS = os.environ['QGIS_PREFIX_PATH']
assert os.path.exists(PATH_QGS)
qgsApp = QgsApplication([], True)
QApplication.addLibraryPath(r'/Applications/QGIS.app/Contents/PlugIns')
QApplication.addLibraryPath(r'/Applications/QGIS.app/Contents/PlugIns/qgis')
qgsApp.setPrefixPath(PATH_QGS, True)
qgsApp.initQgis()
gb = QGroupBox()
gb.setTitle('Sandbox')
PL = PixelLoader()
if False:
files = ['observationcloud/testdata/2014-07-26_LC82270652014207LGN00_BOA.bsq',
'observationcloud/testdata/2014-08-03_LE72270652014215CUB00_BOA.bsq'
]
else:
from eotimeseriesviewer.utils import file_search
searchDir = r'H:\LandsatData\Landsat_NovoProgresso'
files = list(file_search(searchDir, '*227065*band4.img', recursive=True))
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#files = files[0:3]
lyr = QgsRasterLayer(files[0])
coord = lyr.extent().center()
crs = lyr.crs()
l = QVBoxLayout()
btnStart = QPushButton()
btnStop = QPushButton()
prog = QProgressBar()
tboxResults = QPlainTextEdit()
tboxResults.setMaximumHeight(300)
tboxThreads = QPlainTextEdit()
tboxThreads.setMaximumHeight(200)
label = QLabel()
label.setText('Progress')
def showProgress(n,m,md):
prog.setMinimum(0)
prog.setMaximum(m)
prog.setValue(n)
info = []
for k, v in md.items():
info.append('{} = {}'.format(k,str(v)))