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# -*- coding: utf-8 -*-
"""
/***************************************************************************
EnMAPBox
A QGIS plugin
EnMAP-Box V3
-------------------
begin : 2015-08-20
git sha : $Format:%H$
copyright : (C) 2015 by HU-Berlin
email : bj@geo.hu-berlin.de
***************************************************************************/
/***************************************************************************
* *
* This program is free software; you can redistribute it and/or modify *
* it under the terms of the GNU General Public License as published by *
* the Free Software Foundation; either version 2 of the License, or *
* (at your option) any later version. *
* *
***************************************************************************/
"""
import os, sys, re, fnmatch, collections, copy, traceback, six
from qgis.core import *
#os.environ['PATH'] += os.pathsep + r'C:\OSGeo4W64\bin'
from osgeo import gdal, ogr, osr, gdal_array

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#import console.console_output
#console.show_console()
#sys.stdout = console.console_output.writeOut()
#sys.stderr = console.console_output.writeOut()

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print('Can not find QGIS instance')

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import code
import codecs
from timeseriesviewer import jp, mkdir, DIR_SITE_PACKAGES, file_search, dprint
site.addsitedir(DIR_SITE_PACKAGES)
from timeseriesviewer.ui import widgets
from timeseriesviewer.timeseries import TimeSeries, TimeSeriesDatum, SensorInstrument
#I don't know why, but this is required to run this in QGIS
#todo: still required?
path = os.path.abspath(jp(sys.exec_prefix, '../../bin/pythonw.exe'))
if os.path.exists(path):
multiprocessing.set_executable(path)
sys.argv = [ None ]
#ensure that required non-standard modules are available
import pyqtgraph as pg
columnames = ['date','sensor','ns','nl','nb','image','mask']
def __init__(self, TS, parent=None, *args):
super(QAbstractTableModel, self).__init__()
assert isinstance(TS, TimeSeries)
self.TS = TS
def rowCount(self, parent = QModelIndex()):
return len(self.TS)
def columnCount(self, parent = QModelIndex()):
return len(self.columnames)
def removeRows(self, row, count , parent=QModelIndex()):
self.beginRemoveRows(parent, row, row+count-1)
toRemove = self._data[row:row+count]
for i in toRemove:
self._data.remove(i)
self.endRemoveRows()
def getDateFromIndex(self, index):
if index.isValid():
i = index.row()
if i >= 0 and i < len(self.TS):
return self.TS.getTSDs()[i]
def getTimeSeriesDatumFromIndex(self, index):
if index.isValid():
i = index.row()
if i >= 0 and i < len(self.TS):
return None
def data(self, index, role = Qt.DisplayRole):
return None
value = None
ic_name = self.columnames[index.column()]
TSD = self.getTimeSeriesDatumFromIndex(index)
keys = list(TSD.__dict__.keys())
if role == Qt.DisplayRole or role == Qt.ToolTipRole:
if ic_name == 'name':
value = os.path.basename(TSD.pathImg)
elif ic_name == 'sensor':
if role == Qt.ToolTipRole:
value = TSD.sensor.getDescription()
else:
value = str(TSD.sensor)
elif ic_name == 'date':
value = '{}'.format(TSD.date)
elif ic_name == 'image':
value = TSD.pathImg
elif ic_name == 'mask':
value = TSD.pathMsk
elif ic_name in keys:
value = TSD.__dict__[ic_name]
else:
s = ""
elif role == Qt.BackgroundColorRole:
value = None
elif role == Qt.UserRole:
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return value
#def flags(self, index):
# return Qt.ItemIsEnabled
def flags(self, index):
if index.isValid():
item = self.getTimeSeriesDatumFromIndex(index)
cname = self.columnames[index.column()]
if cname.startswith('d'): #relative values can be edited
flags = Qt.ItemIsEnabled | Qt.ItemIsSelectable | Qt.ItemIsEditable
else:
flags = Qt.ItemIsEnabled | Qt.ItemIsSelectable
return flags
#return item.qt_flags(index.column())
return None
def headerData(self, col, orientation, role):
if Qt is None:
return None
if orientation == Qt.Horizontal and role == Qt.DisplayRole:
return self.columnames[col]
elif orientation == Qt.Vertical and role == Qt.DisplayRole:
return col
return None
QAbstractItemModel.__init__(self)
#self.rootItem = TreeItem[]
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def index(self, row, column, parent = QModelIndex()):
if not parent.isValid():
parentItem = self.rootItem
else:
parentItem = parent.internalPointer()
childItem = parentItem.child(row)
if childItem:
return self.createIndex(row, column, childItem)
else:
return QModelIndex()
def setData(self, index, value, role = Qt.EditRole):
if role == Qt.EditRole:
row = index.row()
return False
return False
def data(self, index, role=Qt.DisplayRole):
data = None
if role == Qt.DisplayRole or role == Qt.EditRole:
data = 'sampletext'
return data
def flags(self, QModelIndex):
return Qt.ItemIsSelectable
def rowCount(self, index=QModelIndex()):
#---------------------------------------------------------------------------
def columnCount(self, index=QModelIndex()):
return 1
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class TimeSeriesDatumViewManager(QObject):
def __init__(self, timeSeriesViewer):
assert isinstance(timeSeriesViewer, TimeSeriesViewer)
super(TimeSeriesDatumViewManager, self).__init__()
self.TSV = timeSeriesViewer
self.TSDViews = list()
self.bandViewMananger = self.TSV.bandViewManager
self.bandViewMananger.sigBandViewAdded.connect(self.addBandView)
self.bandViewMananger.sigBandViewRemoved.connect(self.removeBandView)
self.setExtent(self.TSV.TS.getMaxExtent())
self.setMaxTSDViews()
self.setTimeSeries(self.TSV.TS)
self.L = self.TSV.ui.scrollAreaSubsetContent.layout()
self.setSubsetSize(QSize(100,50))
def setSubsetSize(self, size):
assert isinstance(size, QSize)
self.subsetSize = size
for tsdv in self.TSDViews:
tsdv.setSubsetSize(size)
self.adjustScrollArea()
def adjustScrollArea(self):
m = self.L.contentsMargins()
n = len(self.TSDViews)
if n > 0:
refTSDView = self.TSDViews[0]
size = refTSDView.ui.size()
w = n * size.width() + (n-1) * (m.left()+ m.right())
h = max([refTSDView.ui.minimumHeight() + m.top() + m.bottom(),
self.TSV.ui.scrollAreaSubsets.height()-25])
self.L.parentWidget().setFixedSize(w,h)
def setTimeSeries(self,TS):
assert isinstance(TS, TimeSeries)
self.TS = TS
self.TS.sigTimeSeriesDatumAdded.connect(self.createTSDView)
def setMaxTSDViews(self, n=-1):
self.nMaxTSDViews = n
#todo: remove views
def setExtent(self, extent):
self.extent = extent
assert isinstance(extent, QgsRectangle)
tsdviews = sorted(self.TSDViews, key=lambda t:t.TSD)
for tsdview in tsdviews:
tsdview.setSpatialExtent(extent)
def navToDOI(self, TSD):
assert isinstance(TSD, TimeSeriesDatum)
#get widget related to TSD
tsdviews = [t for t in self.TSDViews if t.TSD == TSD]
if len(tsdviews) > 0:
i = self.TSDViews.index(tsdviews[0])+1.5
n = len(self.TSDViews)
scrollBar = self.TSV.ui.scrollAreaSubsets.horizontalScrollBar()
smin = scrollBar.minimum()
smax = scrollBar.maximum()
v = smin + (smax - smin) * float(i) / n
scrollBar.setValue(int(round(v)))
def addBandView(self, bandView):
assert isinstance(bandView, BandView)
w = self.L.parentWidget()
w.setUpdatesEnabled(False)
for tsdv in self.TSDViews:
tsdv.ui.setUpdatesEnabled(False)
for tsdv in self.TSDViews:
tsdv.insertBandView(bandView)
for tsdv in self.TSDViews:
tsdv.ui.setUpdatesEnabled(True)
w.setUpdatesEnabled(True)
def removeBandView(self, bandView):
assert isinstance(bandView, BandView)
for tsdv in self.TSDViews:
tsdv.removeBandView(bandView)
def createTSDView(self, TSD):
assert isinstance(TSD, TimeSeriesDatum)
tsdView = TimeSeriesDatumView(TSD)
tsdView.setSubsetSize(self.subsetSize)
tsdView.setSpatialExtent(self.extent)
self.addTSDView(tsdView)
def removeTSD(self, TSD):
assert isinstance(TSDV, TimeSeriesDatum)
tsdvs = [tsdv for tsdv in self.TSDViews if tsdv.TSD == TSD]
assert len(tsdvs) == 1
self.removeTSDView(tsdvs[0])
def removeTSDView(self, TSDV):
assert isinstance(TSDV, TimeSeriesDatumView)
self.TSDViews.remove(TSDV)
def addTSDView(self, TSDV):
assert isinstance(TSDV, TimeSeriesDatumView)
if len(self.TSDViews) < 10:
pass
bisect.insort(self.TSDViews, TSDV)
TSDV.ui.setParent(self.L.parentWidget())
self.L.addWidget(TSDV.ui)
self.adjustScrollArea()
#self.TSV.ui.scrollAreaSubsetContent.update()
#self.TSV.ui.scrollAreaSubsets.update()
s = ""

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class BandView(QObject):
sigAddBandView = pyqtSignal(object)
sigRemoveBandView = pyqtSignal(object)

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def __init__(self, recommended_bands=None, parent=None, showSensorNames=True):
super(BandView, self).__init__()
self.ui = widgets.BandViewUI(parent)
self.ui.create()
#forward actions with reference to this band view
self.ui.actionAddBandView.triggered.connect(lambda : self.sigAddBandView.emit(self))
self.ui.actionRemoveBandView.triggered.connect(lambda: self.sigRemoveBandView.emit(self))
self.sensorViews = collections.OrderedDict()
self.mShowSensorNames = showSensorNames
def setTitle(self, title):
self.ui.labelViewName.setText(title)
def showSensorNames(self, b):
assert isinstance(b, bool)
self.mShowSensorNames = b
for s,w in self.sensorViews.items():
w.showSensorName(b)
def removeSensor(self, sensor):
assert type(sensor) is SensorInstrument
if sensor in self.sensorViews.keys():
self.sensorViews[sensor].close()
self.sensorViews.pop(sensor)
return True
else:
return False
def hasSensor(self, sensor):
assert type(sensor) is SensorInstrument
return sensor in self.sensorViews.keys()
assert sensor not in self.sensorViews.keys()
w = widgets.ImageChipViewSettings(sensor)
w.showSensorName(self.mShowSensorNames)
self.sensorViews[sensor] = w
l = self.ui.sensorList.layout()
i = l.count() #last widget is a spacer
l.insertWidget(i-1, w.ui)
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class BandViewManager(QObject):
sigSensorAdded = pyqtSignal(SensorInstrument)
sigSensorRemoved = pyqtSignal(SensorInstrument)
sigBandViewAdded = pyqtSignal(BandView)
sigBandViewRemoved = pyqtSignal(BandView)
def __init__(self, timeSeriesViewer):
assert isinstance(timeSeriesViewer, TimeSeriesViewer)
super(BandViewManager, self).__init__()
self.TSV = timeSeriesViewer
self.bandViews = []
def removeSensor(self, sensor):
assert isinstance(sensor, SensorInstrument)
removed = False
for view in self.bandViews:
removed = removed and view.removeSensor(sensor)
if removed:
self.sigSensorRemoved(sensor)
def createBandView(self):
bandView = BandView(parent=self.TSV.ui.scrollAreaBandViewsContent, showSensorNames=False)
bandView.sigAddBandView.connect(self.createBandView)
bandView.sigRemoveBandView.connect(self.removeBandView)
self.addBandView(bandView)
def addBandView(self, bandView):
assert isinstance(bandView, BandView)
l = self.TSV.BVP
self.bandViews.append(bandView)
l.addWidget(bandView.ui)
n = len(self)
for sensor in self.TSV.TS.Sensors:
bandView.addSensor(sensor)
bandView.showSensorNames(n == 1)
bandView.setTitle('#{}'.format(n))
self.sigBandViewAdded.emit(bandView)
def removeBandView(self, bandView):
assert isinstance(bandView, BandView)
self.bandViews.remove(bandView)
self.TSV.BVP.removeWidget(bandView.ui)
bandView.ui.close()
#self.TSV.ui.scrollAreaBandViewsContent.update()
if len(self.bandViews) > 0:
self.bandViews[0].showSensorNames(True)
for i, bv in enumerate(self.bandViews):
bv.setTitle('#{}'.format(i + 1))
self.sigBandViewRemoved.emit(bandView)
def __len__(self):
return len(self.bandViews)
def __iter__(self):
return iter(self.bandViews)
def __getitem__(self, key):
return self.bandViews[key]
def __contains__(self, bandView):
return bandView in self.bandViews
class TimeSeriesDatumView(QObject):
def __init__(self, TSD, parent=None):
super(TimeSeriesDatumView, self).__init__()
self.ui = widgets.TimeSeriesDatumViewUI(parent)
self.ui.create()
self.TSD = None
self.setTimeSeriesDatum(TSD)
self.bandViewCanvases = []
self.L = self.ui.layout()
self.wOffset = self.L.count()-1
self.setSubsetSize(QSize(300,300))
def setSpatialExtent(self, extent):
assert isinstance(extent, QgsRectangle)
for t in self.bandViewCanvases:
c = t[1]
c.setExtent(extent)
def setSubsetSize(self, size):
assert isinstance(size, QSize)
assert size.width() > 5 and size.height() > 5
self.subsetSize = size
m = self.L.contentsMargins()
self.ui.labelTitle.setFixedWidth(size.width())
self.ui.line.setFixedWidth(size.width())
#apply new subset size to existing canvases
for c in self.ui.findChildren(widgets.BandViewMapCanvas):
c.setFixedSize(size)
self.ui.setFixedWidth(size.width() + 2*(m.left() + m.right()))
n = len(self.bandViewCanvases)
#todo: improve size forecast
self.ui.setMinimumHeight((n+1) * size.height())
def setTimeSeriesDatum(self, TSD):
assert isinstance(TSD, TimeSeriesDatum)
self.TSD = TSD
self.ui.labelTitle.setText(str(TSD.date))
for c in self.ui.findChildren(widgets.BandViewMapCanvas):
c.setLayer(self.TSD.pathImg)
def removeBandView(self, bandView):
toRemove = self.findItems(bandView)
for t in toRemove:
self.bandViewCanvases.remove(t)
bandView, canvas = t
self.L.removeWidget(canvas)
canvas.close()
def findItems(self, item):
if isinstance(item, BandView):
return [t for t in self.bandViewCanvases if t[0] == item]
if isinstance(item, widgets.BandViewMapCanvas):
return [t for t in self.bandViewCanvases if t[1] == item]
def insertBandView(self, bandView, i=-1):
assert isinstance(bandView, BandView)
assert len(self.findItems(bandView)) == 0
assert i >= -1 and i <= len(self.bandViewCanvases)
if i == -1:
i = len(self.bandViewCanvases)
canvas = widgets.BandViewMapCanvas(self.ui)
canvas.setLayer(self.TSD.pathImg)
canvas.setFixedSize(self.subsetSize)
self.bandViewCanvases.insert(i, (bandView, canvas))
self.L.insertWidget(self.wOffset + i, canvas)
def __lt__(self, other):
return self.TSD < other.TSD
class RenderJob(object):
def __init__(self, TSD, renderer, destinationId=None):
assert isinstance(TSD, TimeSeriesDatum)
assert isinstance(renderer, QgsRasterRenderer)
self.TSD = TSD
self.renderer = renderer
self.destinationId = destinationId
def __eq__(self, other):
if not isinstance(other, RenderJob):
return False
return self.TSD == other.TSD and \
self.renderer == other.renderer and \
self.destinationId == other.destinationId
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class PixmapBuffer(QObject):
sigProgress = pyqtSignal(int, int)
sigPixmapCreated = pyqtSignal(RenderJob, QPixmap)
def __init__(self):
super(PixmapBuffer, self).__init__()
self.extent = None
self.crs = None
self.size = None
self.nWorkersMax = 1
self.Workers = []
self.PIXMAPS = dict()
self.JOBS = []
self.nTotalJobs = -1
self.nJobsDone = -1
def addWorker(self):
w = Worker()
w.setCrsTransformEnabled(True)
w.sigPixmapCreated.connect(self.newPixmapCreated)
if self.isValid():
self.setWorkerProperties(w)
self.Workers.append(w)
def setWorkerProperties(self, worker):
assert isinstance(worker, Worker)
worker.setFixedSize(self.size)
worker.setDestinationCrs(self.crs)
worker.setExtent(self.extent)
worker.setCenter(self.extent.center())
def newPixmapCreated(self, renderJob, pixmap):
self.JOBS.remove(renderJob)
self.nJobsDone += 1
self.sigPixmapCreated.emit(renderJob, pixmap)
self.sigProgress.emit(self.nJobsDone, self.nTotalJobs)
def isValid(self):
return self.extent != None and self.crs != None and self.size != None
def setExtent(self, extent, crs, maxPx):
self.stopRendering()
assert isinstance(extent, QgsRectangle)
assert isinstance(crs, QgsCoordinateReferenceSystem)
assert isinstance(maxPx, int)
ratio = extent.width() / extent.height()
if ratio < 1: # x is largest side
size = QSize(maxPx, int(maxPx / ratio))
else: # y is largest
size = QSize(int(maxPx * ratio), maxPx)
self.crs = crs
self.size = size
self.extent = extent
for w in self.Workers:
self.setWorkerProperties(w)
return size
def stopRendering(self):
for w in self.Workers:
w.stopRendering()
w.clear()
while len(self.JOBS) > 0:
self.JOBS.pop(0)
self.sigProgress.emit(0, 0)
def loadSubsets(self, jobs):
for j in jobs:
assert isinstance(j, RenderJob)
self.stopRendering()
self.JOBS.extend(jobs)
self.nTotalJobs = len(self.JOBS)
self.nJobsDone = 0
self.sigProgress.emit(0, self.nTotalJobs)
if len(self.Workers) == 0:
self.addWorker()
#split jobs to number of workers
i = 0
chunkSize = int(len(self.JOBS) / len(self.Workers))
assert chunkSize > 0
for i in range(0, len(self.Workers), chunkSize):
worker = self.Workers[i]
j = min(i+chunkSize, len(self.JOBS))
worker.startLayerRendering(self.JOBS[i:j])
class Worker(QgsMapCanvas):
sigPixmapCreated = pyqtSignal(RenderJob, QPixmap)
def __init__(self, *args, **kwds):
super(Worker,self).__init__(*args, **kwds)
self.reg = QgsMapLayerRegistry.instance()
self.painter = QPainter()
self.renderJobs = list()
self.mapCanvasRefreshed.connect(self.createPixmap)
def isBusy(self):
return len(self.renderJobs) != 0
def createPixmap(self, *args):
if len(self.renderJobs) > 0:
pixmap = QPixmap(self.size())
self.painter.begin(pixmap)
self.map().paint(self.painter)
self.painter.end()
assert not pixmap.isNull()
job = self.renderJobs.pop(0)
self.sigPixmapCreated.emit(job, pixmap)
self.startSingleLayerRendering()
def stopLayerRendering(self):
self.stopRendering()
del self.renderJobs[:]
assert self.isBusy() is False
def startLayerRendering(self, renderJobs):
assert isinstance(renderJobs, list)
self.renderJobs.extend(renderJobs)
self.startSingleLayerRendering()
def startSingleLayerRendering(self):
if len(self.renderJobs) > 0:
renderJob = self.renderJobs[0]
assert isinstance(renderJob, RenderJob)
#mapLayer = QgsRasterLayer(renderJob.TSD.pathImg)
mapLayer = renderJob.TSD.lyrImg
mapLayer.setRenderer(renderJob.renderer)
dprint('QgsMapLayerRegistry count: {}'.format(self.reg.count()))
self.reg.addMapLayer(mapLayer)
lyrSet = [QgsMapCanvasLayer(mapLayer)]
self.setLayerSet(lyrSet)
#todo: add crosshair
self.refreshAllLayers()
class ImageChipLabel(QLabel):
clicked = pyqtSignal(object, object)
def __init__(self, time_series_viewer, TSD, renderer):
assert isinstance(time_series_viewer, TimeSeriesViewer)
assert isinstance(TSD, TimeSeriesDatum)
assert isinstance(renderer, QgsRasterRenderer)
super(ImageChipLabel, self).__init__(time_series_viewer.ui)
self.TSD = TSD
self.bn = os.path.basename(self.TSD.pathImg)
self.renderer = renderer
self.setContextMenuPolicy(Qt.DefaultContextMenu)
self.setFrameShape(QFrame.StyledPanel)
self.setSizePolicy(QSizePolicy.Fixed, QSizePolicy.Fixed)
tt = ['Date: {}'.format(TSD.date) \
,'Name: {}'.format(self.bn) \
def contextMenuEvent(self, event):
menu = QMenu()
#add general options
action = menu.addAction('Copy to clipboard')
action.triggered.connect(lambda : QApplication.clipboard().setPixmap(self.pixmap()))
#add QGIS specific options
if self.TSV.iface:
action = menu.addAction('Add {} to QGIS layers'.format(self.bn))
action.triggered.connect(lambda : qgis_add_ins.add_QgsRasterLayer(self.iface, self.TSD.pathImg, self.bands))
menu.exec_(event.globalPos())
def getBoundingBoxPolygon(points, srs=None):
ring = ogr.Geometry(ogr.wkbLinearRing)
for point in points:
ring.AddPoint(point[0], point[1])
bb = ogr.Geometry(ogr.wkbPolygon)
bb.AddGeometry(ring)
_crs = osr.SpatialReference()
_crs.ImportFromWkt(srs.toWkt())
bb.AssignSpatialReference(_crs)
return bb
def getDS(ds):
if type(ds) is not gdal.Dataset:
ds = gdal.Open(ds)
return ds
def getBandNames(lyr):
assert isinstance(lyr, QgsRasterLayer)
dp = lyr.dataProvider()
assert isinstance(dp, QgsRasterDataProvider)
if str(dp.name()) == 'gdal':
s = ""
else:
return lyr
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def getImageDate(ds):
if type(ds) is str:
ds = gdal.Open(ds)
path = ds.GetFileList()[0]
to_check = [os.path.basename(path), os.path.dirname(path)]
regAcqDate = re.compile(r'acquisition (time|date|day)', re.I)
for key, value in ds.GetMetadata_Dict().items():
if regAcqDate.search(key):
to_check.insert(0, value)
for text in to_check:
date = parseAcquisitionDate(text)
if date:
return date
raise Exception('Can not identify acquisition date of {}'.format(path))
def getChip3d(chips, rgb_idx, ranges):
assert len(rgb_idx) == 3 and len(rgb_idx) == len(ranges)
for i in rgb_idx:
assert i in chips.keys()
nl, ns = chips[rgb_idx[0]].shape
a3d = np.ndarray((3,nl,ns), dtype='float')
for i, rgb_i in enumerate(rgb_idx):
range = ranges[i]
data = chips[rgb_i].astype('float')
data -= range[0]
data *= 255./range[1]
a3d[i,:] = data
np.clip(a3d, 0, 255, out=a3d)
return a3d.astype('uint8')
def Array2Image(d3d):
nb, nl, ns = d3d.shape
byteperline = nb
d3d = d3d.transpose([1,2,0]).copy()
return QImage(d3d.data, ns, nl, QImage.Format_RGB888)
self.data = dict()
self.BBox = None
self.SRS = None
def hasDataCube(self, TSD):
return TSD in self.data.keys()
missing = missing - set(self.data[TSD].keys())
assert self.BBox is not None, 'Please initialize the bounding box first.'
if TSD not in self.data.keys():
self.data[TSD] = dict()
self.data[TSD].update(chipData)
def getDataCube(self, TSD):
return self.data.get(TSD)
def getChipArray(self, TSD, band_view, mode='rgb'):
assert mode in ['rgb', 'bgr']
bands = band_view.getBands(TSD.sensor)
band_ranges = band_view.getRanges(TSD.sensor)
nb = len(bands)
assert nb == 3 and nb == len(band_ranges)
assert TSD in self.data.keys(), 'Time Series Datum {} is not in buffer'.format(TSD.getDate())
chipData = self.data[TSD]
for b in bands:
assert b in chipData.keys()
nl, ns = chipData[bands[0]].shape
dtype= 'uint8'
if mode == 'rgb':
ch_dst = [0,1,2]
elif mode == 'bgr':
# r -> dst channel 2
# g -> dst channel 1
# b -> dst channel 0
ch_dst = [2,1,0]
for i, i_dst in enumerate(ch_dst):
offset = band_ranges[i][0]
scale = 255./band_ranges[i][1]
res = pg.rescaleData(chipData[bands[i]], scale, offset, dtype='float')
np.clip(res, 0, 255, out=res)
array_data[:,:,i_dst] = res
return array_data
bands = band_view.getBands(TSD.sensor)
band_ranges = band_view.getRanges(TSD.sensor)
assert TSD in self.data.keys(), 'Time Series Datum {} is not in buffer'.format(TSD.getDate())
for b in bands:
assert b in chipData.keys()
nl, ns = chipData[bands[0]].shape
rgb_data = np.ndarray((3,nl,ns), dtype='float')
for i, b in enumerate(bands):
range = band_ranges[i]
data = chipData[b].astype('float')
data -= range[0]
data *= 255./range[1]
rgb_data[i,:] = data
np.clip(rgb_data, 0, 255, out=rgb_data)
rgb_data = rgb_data.astype('uint8')
if band_view.useMaskValues():
rgb = band_view.getMaskColor()
is_masked = np.where(np.logical_not(chipData['mask']))
for i, c in enumerate(rgb):
rgb_data[i, is_masked[0], is_masked[1]] = c
def getChipImage(self, date, view):
rgb = self.getChipRGB(date, view)
nb, nl, ns = rgb.shape
rgb = rgb.transpose([1,2,0]).copy('C')
return QImage(rgb.data, ns, nl, QImage.Format_RGB888)
def clear(self):
self.data.clear()
def setBoundingBox(self, BBox):
assert type(BBox) is ogr.Geometry
SRS = BBox.GetSpatialReference()
assert SRS is not None
if self.BBox is None or not self.BBox.Equals(BBox) or not self.SRS.IsSame(SRS):
self.BBox = BBox
self.SRS = SRS
def __repr__(self):
info = ['Chipbuffer']
info.append('Bounding Box: {}'.format(self.bbBoxWkt))
info.append('Chips: {}'.format(len(self.data)))
return '\n'.join(info)
list2str = lambda ll : '\n'.join([str(l) for l in ll])